Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.03□□□□□ -1.92
PAX9P55771 AC068790.2-201ENST00000602601 557 ntBASIC3.03□□□□□ -1.92
PAX9P55771 AC068790.3-201ENST00000602988 553 ntBASIC3.03□□□□□ -1.92
PAX9P55771 NDUFA8P1-201ENST00000605525 367 ntBASIC3.03□□□□□ -1.92
PAX9P55771 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.03□□□□□ -1.92
PAX9P55771 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.03□□□□□ -1.92
PAX9P55771 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.03□□□□□ -1.92
PAX9P55771 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.03□□□□□ -1.92
PAX9P55771 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.03□□□□□ -1.92
PAX9P55771 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.03□□□□□ -1.92
PAX9P55771 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
PAX9P55771 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.03□□□□□ -1.92
PAX9P55771 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.03□□□□□ -1.92
PAX9P55771 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.93
PAX9P55771 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.03□□□□□ -1.93
PAX9P55771 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
PAX9P55771 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PAX9P55771 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PAX9P55771 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
PAX9P55771 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.02□□□□□ -1.93
PAX9P55771 RNY4P16-201ENST00000364768 94 ntBASIC3.02□□□□□ -1.93
PAX9P55771 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 RPS26P8-201ENST00000393490 348 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AL136116.1-201ENST00000403591 381 ntBASIC3.02□□□□□ -1.93
PAX9P55771 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 AL807761.1-201ENST00000417622 171 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 AC104651.1-201ENST00000427559 735 ntBASIC3.02□□□□□ -1.93
PAX9P55771 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.02□□□□□ -1.93
PAX9P55771 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.02□□□□□ -1.93
PAX9P55771 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 RPL21P11-201ENST00000461458 483 ntBASIC3.02□□□□□ -1.93
PAX9P55771 RPS23P7-201ENST00000466210 444 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.02□□□□□ -1.93
PAX9P55771 AC105137.1-201ENST00000484355 562 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.02□□□□□ -1.93
PAX9P55771 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 Y_RNA.672-201ENST00000516289 104 ntBASIC3.02□□□□□ -1.93
PAX9P55771 RN7SKP60-201ENST00000516985 239 ntBASIC3.02□□□□□ -1.93
PAX9P55771 NDUFB9P3-201ENST00000521269 501 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.02□□□□□ -1.93
PAX9P55771 AP003392.2-201ENST00000527269 208 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.02□□□□□ -1.93
PAX9P55771 AL133153.1-201ENST00000557756 303 ntBASIC3.02□□□□□ -1.93
PAX9P55771 MIR3146-201ENST00000580367 79 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AC023575.1-201ENST00000580510 358 ntBASIC3.02□□□□□ -1.93
PAX9P55771 ZNF415P1-201ENST00000582279 1166 ntBASIC3.02□□□□□ -1.93
PAX9P55771 MIR3138-201ENST00000585238 82 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.02□□□□□ -1.93
PAX9P55771 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 AC011468.4-201ENST00000603942 409 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.02□□□□□ -1.93
PAX9P55771 AL161729.4-201ENST00000604650 476 ntBASIC3.02□□□□□ -1.93
PAX9P55771 SNORA62.6-201ENST00000606322 83 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AC013562.2-201ENST00000611632 603 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AL450472.3-201ENST00000615578 367 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AL445567.2-201ENST00000618935 498 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.02□□□□□ -1.93
PAX9P55771 PLCE1P1-201ENST00000622094 305 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AL732618.1-201ENST00000623251 301 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AC110994.2-201ENST00000635481 492 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AC244258.1-201ENST00000637553 1071 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AL392088.2-201ENST00000637607 285 ntBASIC3.02□□□□□ -1.93
PAX9P55771 OR52H1-202ENST00000641796 1061 ntBASIC3.02□□□□□ -1.93
PAX9P55771 AL365440.1-201ENST00000436135 2167 ntBASIC3.02□□□□□ -1.93
PAX9P55771 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PAX9P55771 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PAX9P55771 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PAX9P55771 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PAX9P55771 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PAX9P55771 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PAX9P55771 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PAX9P55771 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PAX9P55771 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.01□□□□□ -1.93
PAX9P55771 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.01□□□□□ -1.93
PAX9P55771 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.01□□□□□ -1.93
PAX9P55771 RNU5E-1-201ENST00000362477 120 ntBASIC3.01□□□□□ -1.93
PAX9P55771 RNU5E-8P-201ENST00000363502 116 ntBASIC3.01□□□□□ -1.93
PAX9P55771 RNA5SP42-201ENST00000364278 115 ntBASIC3.01□□□□□ -1.93
PAX9P55771 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PAX9P55771 RNU6-637P-201ENST00000384050 107 ntBASIC3.01□□□□□ -1.93
PAX9P55771 Y_RNA.505-201ENST00000384489 102 ntBASIC3.01□□□□□ -1.93
PAX9P55771 RNU6-882P-201ENST00000391025 103 ntBASIC3.01□□□□□ -1.93
PAX9P55771 RNU2-43P-201ENST00000410306 190 ntBASIC3.01□□□□□ -1.93
PAX9P55771 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.01□□□□□ -1.93
PAX9P55771 MTCO3P12-201ENST00000416718 547 ntBASIC3.01□□□□□ -1.93
PAX9P55771 C1DP2-201ENST00000418167 426 ntBASIC3.01□□□□□ -1.93
PAX9P55771 USP9YP36-201ENST00000424581 829 ntBASIC3.01□□□□□ -1.93
PAX9P55771 AC019097.1-201ENST00000424783 735 ntBASIC3.01□□□□□ -1.93
PAX9P55771 TIMM9P1-201ENST00000436122 256 ntBASIC3.01□□□□□ -1.93
PAX9P55771 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.01□□□□□ -1.93
PAX9P55771 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.01□□□□□ -1.93
PAX9P55771 AC006480.1-201ENST00000449887 378 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms