Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.83□□□□□ -1.96
LIM2P55344 RPS24P7-201ENST00000416921 246 ntBASIC2.83□□□□□ -1.96
LIM2P55344 RPL27AP8-201ENST00000424277 446 ntBASIC2.83□□□□□ -1.96
LIM2P55344 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.83□□□□□ -1.96
LIM2P55344 TXNL1P1-201ENST00000429528 554 ntBASIC2.83□□□□□ -1.96
LIM2P55344 ZYG11AP1-201ENST00000430329 837 ntBASIC2.83□□□□□ -1.96
LIM2P55344 Z80107.1-201ENST00000436830 412 ntBASIC2.83□□□□□ -1.96
LIM2P55344 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.83□□□□□ -1.96
LIM2P55344 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.83□□□□□ -1.96
LIM2P55344 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.83□□□□□ -1.96
LIM2P55344 AP002884.2-201ENST00000471647 395 ntBASIC2.83□□□□□ -1.96
LIM2P55344 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.83□□□□□ -1.96
LIM2P55344 RN7SL633P-201ENST00000488974 297 ntBASIC2.83□□□□□ -1.96
LIM2P55344 OR2A20P-203ENST00000498397 1268 ntBASIC2.83□□□□□ -1.96
LIM2P55344 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.83□□□□□ -1.96
LIM2P55344 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.83□□□□□ -1.96
LIM2P55344 AC024589.1-201ENST00000512207 263 ntBASIC2.83□□□□□ -1.96
LIM2P55344 RNA5SP341-201ENST00000516261 117 ntBASIC2.83□□□□□ -1.96
LIM2P55344 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
LIM2P55344 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.83□□□□□ -1.96
LIM2P55344 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LIM2P55344 AP002404.1-201ENST00000532005 451 ntBASIC2.83□□□□□ -1.96
LIM2P55344 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LIM2P55344 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.83□□□□□ -1.96
LIM2P55344 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LIM2P55344 OR6C7P-201ENST00000547875 934 ntBASIC2.83□□□□□ -1.96
LIM2P55344 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.83□□□□□ -1.96
LIM2P55344 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.83□□□□□ -1.96
LIM2P55344 DUXAP1-201ENST00000556632 463 ntBASIC2.83□□□□□ -1.96
LIM2P55344 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.83□□□□□ -1.96
LIM2P55344 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.83□□□□□ -1.96
LIM2P55344 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.83□□□□□ -1.96
LIM2P55344 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LIM2P55344 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.83□□□□□ -1.96
LIM2P55344 AC061975.8-201ENST00000587058 721 ntBASIC2.83□□□□□ -1.96
LIM2P55344 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.83□□□□□ -1.96
LIM2P55344 BDH2P1-201ENST00000602288 736 ntBASIC2.83□□□□□ -1.96
LIM2P55344 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.83□□□□□ -1.96
LIM2P55344 AL161756.2-201ENST00000604597 246 ntBASIC2.83□□□□□ -1.96
LIM2P55344 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.83□□□□□ -1.96
LIM2P55344 AL390240.1-201ENST00000612950 384 ntBASIC2.83□□□□□ -1.96
LIM2P55344 AL110115.1-201ENST00000614396 364 ntBASIC2.83□□□□□ -1.96
LIM2P55344 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.83□□□□□ -1.96
LIM2P55344 AP000484.1-201ENST00000620067 1252 ntBASIC2.83□□□□□ -1.96
LIM2P55344 PLCE1P1-201ENST00000622094 305 ntBASIC2.83□□□□□ -1.96
LIM2P55344 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.83□□□□□ -1.96
LIM2P55344 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.82□□□□□ -1.96
LIM2P55344 FRG1BP-201ENST00000278882 761 ntBASIC2.82□□□□□ -1.96
LIM2P55344 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LIM2P55344 RNU6-931P-201ENST00000363850 107 ntBASIC2.82□□□□□ -1.96
LIM2P55344 MIR491-201ENST00000384877 84 ntBASIC2.82□□□□□ -1.96
LIM2P55344 AL138885.1-201ENST00000405921 675 ntBASIC2.82□□□□□ -1.96
LIM2P55344 RNU2-43P-201ENST00000410306 190 ntBASIC2.82□□□□□ -1.96
LIM2P55344 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.82□□□□□ -1.96
LIM2P55344 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.82□□□□□ -1.96
LIM2P55344 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.82□□□□□ -1.96
LIM2P55344 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.82□□□□□ -1.96
LIM2P55344 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.82□□□□□ -1.96
LIM2P55344 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.82□□□□□ -1.96
LIM2P55344 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.82□□□□□ -1.96
LIM2P55344 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.82□□□□□ -1.96
LIM2P55344 MTND1P32-201ENST00000433043 938 ntBASIC2.82□□□□□ -1.96
LIM2P55344 AC244505.4-201ENST00000434905 287 ntBASIC2.82□□□□□ -1.96
LIM2P55344 MTND5P14-201ENST00000441481 1267 ntBASIC2.82□□□□□ -1.96
LIM2P55344 SSXP5-201ENST00000443473 287 ntBASIC2.82□□□□□ -1.96
LIM2P55344 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.82□□□□□ -1.96
LIM2P55344 SNORD121B-201ENST00000458838 81 ntBASIC2.82□□□□□ -1.96
LIM2P55344 RPL21P41-201ENST00000459863 264 ntBASIC2.82□□□□□ -1.96
LIM2P55344 AC092754.2-201ENST00000463506 460 ntBASIC2.82□□□□□ -1.96
LIM2P55344 RN7SL330P-201ENST00000469709 307 ntBASIC2.82□□□□□ -1.96
LIM2P55344 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.82□□□□□ -1.96
LIM2P55344 AC110760.3-202ENST00000515177 371 ntBASIC2.82□□□□□ -1.96
LIM2P55344 IGKV2-23-201ENST00000518729 323 ntBASIC2.82□□□□□ -1.96
LIM2P55344 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.82□□□□□ -1.96
LIM2P55344 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LIM2P55344 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.82□□□□□ -1.96
LIM2P55344 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.82□□□□□ -1.96
LIM2P55344 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.82□□□□□ -1.96
LIM2P55344 TRAV37-201ENST00000553906 342 ntBASIC2.82□□□□□ -1.96
LIM2P55344 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.82□□□□□ -1.96
LIM2P55344 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.82□□□□□ -1.96
LIM2P55344 AGGF1P5-201ENST00000567900 919 ntBASIC2.82□□□□□ -1.96
LIM2P55344 MIR4325-201ENST00000583049 90 ntBASIC2.82□□□□□ -1.96
LIM2P55344 MIR4760-201ENST00000585040 80 ntBASIC2.82□□□□□ -1.96
LIM2P55344 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.82□□□□□ -1.96
LIM2P55344 VN1R92P-201ENST00000598511 928 ntBASIC2.82□□□□□ -1.96
LIM2P55344 AC011451.2-201ENST00000604303 598 ntBASIC2.82□□□□□ -1.96
LIM2P55344 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LIM2P55344 RNU6-88P-201ENST00000606801 100 ntBASIC2.82□□□□□ -1.96
LIM2P55344 AC002550.2-201ENST00000621246 394 ntBASIC2.82□□□□□ -1.96
LIM2P55344 MIR4275-201ENST00000636486 87 ntBASIC2.82□□□□□ -1.96
LIM2P55344 AC138915.3-201ENST00000562908 1389 ntBASIC2.82□□□□□ -1.96
LIM2P55344 AL353743.1-202ENST00000431724 1695 ntBASIC2.82□□□□□ -1.96
LIM2P55344 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.82□□□□□ -1.96
LIM2P55344 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LIM2P55344 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LIM2P55344 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.81□□□□□ -1.96
LIM2P55344 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.81□□□□□ -1.96
LIM2P55344 Y_RNA.234-201ENST00000364409 97 ntBASIC2.81□□□□□ -1.96
LIM2P55344 SNORA9-201ENST00000384215 133 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms