Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU4-12P-201ENST00000365233 139 ntBASIC3.6□□□□□ -1.83
CDH12P55289 RNU6-169P-201ENST00000365336 107 ntBASIC3.6□□□□□ -1.83
CDH12P55289 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CDH12P55289 SNORA20.2-201ENST00000383922 131 ntBASIC3.6□□□□□ -1.83
CDH12P55289 Y_RNA.409-201ENST00000383990 98 ntBASIC3.6□□□□□ -1.83
CDH12P55289 RPL7P60-201ENST00000397636 735 ntBASIC3.6□□□□□ -1.83
CDH12P55289 MIR1183-201ENST00000408856 89 ntBASIC3.6□□□□□ -1.83
CDH12P55289 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH12P55289 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH12P55289 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH12P55289 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH12P55289 UBDP1-202ENST00000457888 382 ntBASIC3.6□□□□□ -1.83
CDH12P55289 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH12P55289 AC023598.1-201ENST00000472521 361 ntBASIC3.6□□□□□ -1.83
CDH12P55289 AC007182.2-201ENST00000489251 402 ntBASIC3.6□□□□□ -1.83
CDH12P55289 TRBV12-2-201ENST00000489763 344 ntBASIC3.6□□□□□ -1.83
CDH12P55289 AL132838.2-201ENST00000492041 314 ntBASIC3.6□□□□□ -1.83
CDH12P55289 AC009646.1-201ENST00000510455 318 ntBASIC3.6□□□□□ -1.83
CDH12P55289 FTH1P21-201ENST00000512179 511 ntBASIC3.6□□□□□ -1.83
CDH12P55289 RNU6-1095P-201ENST00000516148 108 ntBASIC3.6□□□□□ -1.83
CDH12P55289 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH12P55289 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH12P55289 OR4R3P-201ENST00000525084 838 ntBASIC3.6□□□□□ -1.83
CDH12P55289 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH12P55289 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH12P55289 AK6P1-201ENST00000540219 478 ntBASIC3.6□□□□□ -1.83
CDH12P55289 AC126177.3-201ENST00000551839 688 ntBASIC3.6□□□□□ -1.83
CDH12P55289 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH12P55289 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH12P55289 AC023575.1-201ENST00000580510 358 ntBASIC3.6□□□□□ -1.83
CDH12P55289 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH12P55289 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH12P55289 AL136363.1-201ENST00000605349 337 ntBASIC3.6□□□□□ -1.83
CDH12P55289 AL158211.4-201ENST00000606988 584 ntBASIC3.6□□□□□ -1.83
CDH12P55289 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH12P55289 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH12P55289 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH12P55289 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CDH12P55289 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CDH12P55289 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH12P55289 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH12P55289 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH12P55289 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH12P55289 Y_RNA.159-201ENST00000363674 87 ntBASIC3.59□□□□□ -1.83
CDH12P55289 RNA5SP130-201ENST00000364431 114 ntBASIC3.59□□□□□ -1.83
CDH12P55289 Y_RNA.256-201ENST00000364594 104 ntBASIC3.59□□□□□ -1.83
CDH12P55289 RNY3P13-201ENST00000365542 102 ntBASIC3.59□□□□□ -1.83
CDH12P55289 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CDH12P55289 MIR135A2-201ENST00000384854 100 ntBASIC3.59□□□□□ -1.83
CDH12P55289 MIR124-3-201ENST00000384866 87 ntBASIC3.59□□□□□ -1.83
CDH12P55289 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH12P55289 RNU6-837P-201ENST00000391056 108 ntBASIC3.59□□□□□ -1.83
CDH12P55289 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH12P55289 AL590002.1-201ENST00000406554 418 ntBASIC3.59□□□□□ -1.83
CDH12P55289 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH12P55289 AC016397.1-201ENST00000412463 242 ntBASIC3.59□□□□□ -1.83
CDH12P55289 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH12P55289 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH12P55289 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH12P55289 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CDH12P55289 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.59□□□□□ -1.83
CDH12P55289 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH12P55289 AC002486.1-201ENST00000435098 391 ntBASIC3.59□□□□□ -1.83
CDH12P55289 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH12P55289 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.59□□□□□ -1.83
CDH12P55289 TBCAP1-201ENST00000436520 327 ntBASIC3.59□□□□□ -1.83
CDH12P55289 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH12P55289 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH12P55289 NANOGP10-201ENST00000453325 895 ntBASIC3.59□□□□□ -1.83
CDH12P55289 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH12P55289 MTCO2P29-201ENST00000465212 189 ntBASIC3.59□□□□□ -1.83
CDH12P55289 AL672167.3-201ENST00000465951 960 ntBASIC3.59□□□□□ -1.83
CDH12P55289 MTCO3P38-201ENST00000468910 766 ntBASIC3.59□□□□□ -1.83
CDH12P55289 AC006463.2-201ENST00000473326 348 ntBASIC3.59□□□□□ -1.83
CDH12P55289 RPS23P1-201ENST00000491662 432 ntBASIC3.59□□□□□ -1.83
CDH12P55289 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.59□□□□□ -1.83
CDH12P55289 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH12P55289 AC010493.1-201ENST00000513479 292 ntBASIC3.59□□□□□ -1.83
CDH12P55289 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH12P55289 RAB9BP1-201ENST00000519581 626 ntBASIC3.59□□□□□ -1.83
CDH12P55289 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH12P55289 MTCYBP41-201ENST00000528913 1123 ntBASIC3.59□□□□□ -1.83
CDH12P55289 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH12P55289 AP000857.1-201ENST00000532151 543 ntBASIC3.59□□□□□ -1.83
CDH12P55289 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH12P55289 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH12P55289 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH12P55289 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH12P55289 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH12P55289 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH12P55289 AL133153.1-201ENST00000557756 303 ntBASIC3.59□□□□□ -1.83
CDH12P55289 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH12P55289 MIR3939-201ENST00000582614 106 ntBASIC3.59□□□□□ -1.83
CDH12P55289 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CDH12P55289 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH12P55289 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH12P55289 AC010680.3-201ENST00000604215 520 ntBASIC3.59□□□□□ -1.83
CDH12P55289 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH12P55289 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH12P55289 uc_338.32-201ENST00000615087 172 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms