Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.39□□□□□ -1.87
PDX1P52945 MIR548AB-201ENST00000584917 84 ntBASIC3.39□□□□□ -1.87
PDX1P52945 U73023.1-201ENST00000603134 700 ntBASIC3.39□□□□□ -1.87
PDX1P52945 AL034351.1-201ENST00000605288 668 ntBASIC3.39□□□□□ -1.87
PDX1P52945 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.39□□□□□ -1.87
PDX1P52945 AC091965.4-201ENST00000607691 587 ntBASIC3.39□□□□□ -1.87
PDX1P52945 AC245008.1-201ENST00000608123 476 ntBASIC3.39□□□□□ -1.87
PDX1P52945 CRYM-AS1-204ENST00000637983 556 ntBASIC3.39□□□□□ -1.87
PDX1P52945 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDX1P52945 CEP170P1-201ENST00000502249 4587 ntBASIC3.39□□□□□ -1.87
PDX1P52945 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDX1P52945 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.39□□□□□ -1.87
PDX1P52945 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PDX1P52945 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.38□□□□□ -1.87
PDX1P52945 AC007656.2-201ENST00000624902 4547 ntBASIC3.38□□□□□ -1.87
PDX1P52945 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDX1P52945 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PDX1P52945 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDX1P52945 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PDX1P52945 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PDX1P52945 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PDX1P52945 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDX1P52945 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PDX1P52945 RNU6-97P-201ENST00000363387 104 ntBASIC3.38□□□□□ -1.87
PDX1P52945 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDX1P52945 RNU6-809P-201ENST00000384461 107 ntBASIC3.38□□□□□ -1.87
PDX1P52945 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PDX1P52945 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDX1P52945 BX323014.1-201ENST00000412876 237 ntBASIC3.38□□□□□ -1.87
PDX1P52945 SSXP9-201ENST00000417503 292 ntBASIC3.38□□□□□ -1.87
PDX1P52945 CYCSP46-201ENST00000423569 204 ntBASIC3.38□□□□□ -1.87
PDX1P52945 RPL7P36-201ENST00000444633 681 ntBASIC3.38□□□□□ -1.87
PDX1P52945 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.38□□□□□ -1.87
PDX1P52945 AC092754.2-201ENST00000463506 460 ntBASIC3.38□□□□□ -1.87
PDX1P52945 AC010285.1-201ENST00000470580 392 ntBASIC3.38□□□□□ -1.87
PDX1P52945 ST13P14-201ENST00000474095 734 ntBASIC3.38□□□□□ -1.87
PDX1P52945 AC021382.1-201ENST00000483523 359 ntBASIC3.38□□□□□ -1.87
PDX1P52945 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.38□□□□□ -1.87
PDX1P52945 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.38□□□□□ -1.87
PDX1P52945 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.38□□□□□ -1.87
PDX1P52945 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.38□□□□□ -1.87
PDX1P52945 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.38□□□□□ -1.87
PDX1P52945 AL121603.1-201ENST00000553815 142 ntBASIC3.38□□□□□ -1.87
PDX1P52945 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.38□□□□□ -1.87
PDX1P52945 OR4K8P-201ENST00000578842 1048 ntBASIC3.38□□□□□ -1.87
PDX1P52945 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.38□□□□□ -1.87
PDX1P52945 PRELID3BP8-201ENST00000604148 295 ntBASIC3.38□□□□□ -1.87
PDX1P52945 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.38□□□□□ -1.87
PDX1P52945 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.38□□□□□ -1.87
PDX1P52945 AL713922.2-201ENST00000619384 716 ntBASIC3.38□□□□□ -1.87
PDX1P52945 Z69908.1-201ENST00000622603 247 ntBASIC3.38□□□□□ -1.87
PDX1P52945 AP003399.1-201ENST00000637534 361 ntBASIC3.38□□□□□ -1.87
PDX1P52945 AL732372.2-225ENST00000642124 456 ntBASIC3.38□□□□□ -1.87
PDX1P52945 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDX1P52945 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.37□□□□□ -1.87
PDX1P52945 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDX1P52945 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PDX1P52945 Y_RNA.111-201ENST00000363248 100 ntBASIC3.37□□□□□ -1.87
PDX1P52945 MTHFD2P2-201ENST00000407725 247 ntBASIC3.37□□□□□ -1.87
PDX1P52945 RN7SKP53-201ENST00000411337 315 ntBASIC3.37□□□□□ -1.87
PDX1P52945 RPL30P2-201ENST00000414021 291 ntBASIC3.37□□□□□ -1.87
PDX1P52945 RAD23BP2-201ENST00000416003 1207 ntBASIC3.37□□□□□ -1.87
PDX1P52945 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.37□□□□□ -1.87
PDX1P52945 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.37□□□□□ -1.87
PDX1P52945 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.37□□□□□ -1.87
PDX1P52945 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.37□□□□□ -1.87
PDX1P52945 FAM103A2P-201ENST00000444122 354 ntBASIC3.37□□□□□ -1.87
PDX1P52945 TAF9P1-201ENST00000445421 515 ntBASIC3.37□□□□□ -1.87
PDX1P52945 BMI1P1-201ENST00000445879 941 ntBASIC3.37□□□□□ -1.87
PDX1P52945 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.37□□□□□ -1.87
PDX1P52945 TAF9P2-201ENST00000454958 515 ntBASIC3.37□□□□□ -1.87
PDX1P52945 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.37□□□□□ -1.87
PDX1P52945 RPL23AP55-201ENST00000498163 452 ntBASIC3.37□□□□□ -1.87
PDX1P52945 AC116347.2-201ENST00000514912 523 ntBASIC3.37□□□□□ -1.87
PDX1P52945 RNU6-528P-201ENST00000516926 100 ntBASIC3.37□□□□□ -1.87
PDX1P52945 RNU6-1231P-201ENST00000517185 103 ntBASIC3.37□□□□□ -1.87
PDX1P52945 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.37□□□□□ -1.87
PDX1P52945 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.37□□□□□ -1.87
PDX1P52945 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.37□□□□□ -1.87
PDX1P52945 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PDX1P52945 AC012065.4-201ENST00000602445 679 ntBASIC3.37□□□□□ -1.87
PDX1P52945 AC112187.2-201ENST00000604345 283 ntBASIC3.37□□□□□ -1.87
PDX1P52945 AC135507.1-201ENST00000607214 561 ntBASIC3.37□□□□□ -1.87
PDX1P52945 AC104010.1-201ENST00000616889 150 ntBASIC3.37□□□□□ -1.87
PDX1P52945 AC002550.2-201ENST00000621246 394 ntBASIC3.37□□□□□ -1.87
PDX1P52945 AP003355.3-201ENST00000623465 114 ntBASIC3.37□□□□□ -1.87
PDX1P52945 AC079597.1-201ENST00000624306 508 ntBASIC3.37□□□□□ -1.87
PDX1P52945 CCT4P2-201ENST00000233836 1548 ntBASIC3.37□□□□□ -1.87
PDX1P52945 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PDX1P52945 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PDX1P52945 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDX1P52945 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDX1P52945 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
PDX1P52945 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PDX1P52945 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PDX1P52945 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDX1P52945 U3.4-201ENST00000363352 213 ntBASIC3.36□□□□□ -1.87
PDX1P52945 RNU5F-7P-201ENST00000363696 115 ntBASIC3.36□□□□□ -1.87
PDX1P52945 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
PDX1P52945 RNU6-359P-201ENST00000365466 108 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms