Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.14□□□□□ -1.91
MSH6P52701 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
MSH6P52701 AC073264.1-201ENST00000411508 416 ntBASIC3.13□□□□□ -1.91
MSH6P52701 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.13□□□□□ -1.91
MSH6P52701 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH6P52701 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH6P52701 AC005517.2-201ENST00000424673 553 ntBASIC3.13□□□□□ -1.91
MSH6P52701 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.13□□□□□ -1.91
MSH6P52701 SETP8-201ENST00000435341 628 ntBASIC3.13□□□□□ -1.91
MSH6P52701 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH6P52701 AL050341.1-201ENST00000447743 313 ntBASIC3.13□□□□□ -1.91
MSH6P52701 RPS15AP1-201ENST00000457423 391 ntBASIC3.13□□□□□ -1.91
MSH6P52701 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.13□□□□□ -1.91
MSH6P52701 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MSH6P52701 AC087879.1-201ENST00000474343 374 ntBASIC3.13□□□□□ -1.91
MSH6P52701 RPS26P21-201ENST00000475397 348 ntBASIC3.13□□□□□ -1.91
MSH6P52701 RPL38P4-201ENST00000502376 214 ntBASIC3.13□□□□□ -1.91
MSH6P52701 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.13□□□□□ -1.91
MSH6P52701 XKRY-201ENST00000510392 1100 ntBASIC3.13□□□□□ -1.91
MSH6P52701 HMGB1P41-201ENST00000520234 440 ntBASIC3.13□□□□□ -1.91
MSH6P52701 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.13□□□□□ -1.91
MSH6P52701 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH6P52701 AC093510.2-201ENST00000562820 896 ntBASIC3.13□□□□□ -1.91
MSH6P52701 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.13□□□□□ -1.91
MSH6P52701 AP002906.1-201ENST00000603405 233 ntBASIC3.13□□□□□ -1.91
MSH6P52701 AC009570.1-201ENST00000609599 745 ntBASIC3.13□□□□□ -1.91
MSH6P52701 AC084824.5-201ENST00000612009 413 ntBASIC3.13□□□□□ -1.91
MSH6P52701 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
MSH6P52701 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.13□□□□□ -1.91
MSH6P52701 AC068880.4-201ENST00000623082 495 ntBASIC3.13□□□□□ -1.91
MSH6P52701 AC093875.1-201ENST00000623688 504 ntBASIC3.13□□□□□ -1.91
MSH6P52701 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.13□□□□□ -1.91
MSH6P52701 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
MSH6P52701 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
MSH6P52701 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MSH6P52701 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MSH6P52701 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.13□□□□□ -1.91
MSH6P52701 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
MSH6P52701 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MSH6P52701 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH6P52701 RPS3AP9-201ENST00000417027 792 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH6P52701 DPPA2P1-201ENST00000428060 556 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AC108667.1-201ENST00000428618 249 ntBASIC3.12□□□□□ -1.91
MSH6P52701 RPS15AP28-201ENST00000435088 386 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH6P52701 AC004866.2-201ENST00000438285 481 ntBASIC3.12□□□□□ -1.91
MSH6P52701 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.12□□□□□ -1.91
MSH6P52701 OR51B8P-201ENST00000449892 769 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.12□□□□□ -1.91
MSH6P52701 RNU6-467P-201ENST00000517027 110 ntBASIC3.12□□□□□ -1.91
MSH6P52701 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.12□□□□□ -1.91
MSH6P52701 AC010198.2-201ENST00000550612 259 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH6P52701 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.12□□□□□ -1.91
MSH6P52701 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.12□□□□□ -1.91
MSH6P52701 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH6P52701 AC105137.2-201ENST00000569073 466 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AC034268.2-201ENST00000571784 482 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AC093673.2-201ENST00000609674 331 ntBASIC3.12□□□□□ -1.91
MSH6P52701 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.12□□□□□ -1.91
MSH6P52701 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
MSH6P52701 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MSH6P52701 PABPC1P7-201ENST00000413177 1513 ntBASIC3.12□□□□□ -1.91
MSH6P52701 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH6P52701 RPL22P22-201ENST00000395439 379 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.12□□□□□ -1.91
MSH6P52701 AC098826.1-201ENST00000433943 471 ntBASIC3.12□□□□□ -1.91
MSH6P52701 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH6P52701 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.12□□□□□ -1.91
MSH6P52701 FAM92A1P2-202ENST00000504766 877 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AC104115.2-201ENST00000523026 687 ntBASIC3.12□□□□□ -1.91
MSH6P52701 OR4R2P-201ENST00000530815 597 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH6P52701 MIR4789-201ENST00000577469 82 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.12□□□□□ -1.91
MSH6P52701 BPTFP1-201ENST00000579209 492 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.12□□□□□ -1.91
MSH6P52701 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.12□□□□□ -1.91
MSH6P52701 AC013468.1-201ENST00000608680 598 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.12□□□□□ -1.91
MSH6P52701 AL121594.5-201ENST00000631724 573 ntBASIC3.12□□□□□ -1.91
MSH6P52701 AC068620.4-201ENST00000636730 1182 ntBASIC3.12□□□□□ -1.91
MSH6P52701 SGO1P1-201ENST00000603525 1447 ntBASIC3.11□□□□□ -1.91
MSH6P52701 AC007256.1-201ENST00000392253 2765 ntBASIC3.11□□□□□ -1.91
MSH6P52701 Y_RNA.796-201ENST00000364268 102 ntBASIC3.11□□□□□ -1.91
MSH6P52701 Y_RNA.799-201ENST00000364992 102 ntBASIC3.11□□□□□ -1.91
MSH6P52701 U6.112-201ENST00000384129 70 ntBASIC3.11□□□□□ -1.91
MSH6P52701 RNU6-441P-201ENST00000384545 106 ntBASIC3.11□□□□□ -1.91
MSH6P52701 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
MSH6P52701 AL591416.1-201ENST00000404015 867 ntBASIC3.11□□□□□ -1.91
MSH6P52701 ATG3P1-201ENST00000419507 911 ntBASIC3.11□□□□□ -1.91
MSH6P52701 AC009237.2-201ENST00000421358 284 ntBASIC3.11□□□□□ -1.91
MSH6P52701 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.11□□□□□ -1.91
MSH6P52701 RNU7-140P-201ENST00000459546 60 ntBASIC3.11□□□□□ -1.91
MSH6P52701 RPL36AP21-201ENST00000490372 323 ntBASIC3.11□□□□□ -1.91
MSH6P52701 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.11□□□□□ -1.91
MSH6P52701 AC026412.2-201ENST00000512270 1075 ntBASIC3.11□□□□□ -1.91
MSH6P52701 AC104057.1-201ENST00000515547 497 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms