Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.56□□□□□ -2
CX3CR1P49238 AC090774.1-201ENST00000435925 246 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.56□□□□□ -2
CX3CR1P49238 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.56□□□□□ -2
CX3CR1P49238 AC234775.1-201ENST00000454247 670 ntBASIC2.56□□□□□ -2
CX3CR1P49238 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.56□□□□□ -2
CX3CR1P49238 RPS27AP9-201ENST00000477681 438 ntBASIC2.56□□□□□ -2
CX3CR1P49238 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.56□□□□□ -2
CX3CR1P49238 AC009901.1-201ENST00000506703 541 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.56□□□□□ -2
CX3CR1P49238 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.56□□□□□ -2
CX3CR1P49238 RN7SKP31-201ENST00000516354 278 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AC009812.2-201ENST00000517657 457 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.56□□□□□ -2
CX3CR1P49238 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.56□□□□□ -2
CX3CR1P49238 OR5G4P-201ENST00000525251 760 ntBASIC2.56□□□□□ -2
CX3CR1P49238 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
CX3CR1P49238 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.56□□□□□ -2
CX3CR1P49238 AC125611.2-201ENST00000551907 647 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.56□□□□□ -2
CX3CR1P49238 AC034105.3-201ENST00000565294 442 ntBASIC2.56□□□□□ -2
CX3CR1P49238 MIR3912-201ENST00000577566 105 ntBASIC2.56□□□□□ -2
CX3CR1P49238 MIR1254-2-201ENST00000579553 63 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AL020991.1-201ENST00000612314 373 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AC243773.3-201ENST00000613270 256 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AC090132.2-201ENST00000615881 347 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AL596245.1-201ENST00000618994 362 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AC244100.1-202ENST00000621554 382 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AC079597.1-201ENST00000624306 508 ntBASIC2.56□□□□□ -2
CX3CR1P49238 CDR1-202ENST00000625883 1485 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AC092447.7-201ENST00000422212 1621 ntBASIC2.56□□□□□ -2
CX3CR1P49238 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.56□□□□□ -2
CX3CR1P49238 AC099654.7-201ENST00000635788 2127 ntBASIC2.56□□□□□ -2
CX3CR1P49238 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CX3CR1P49238 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CX3CR1P49238 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CX3CR1P49238 RPL9P7-201ENST00000330965 580 ntBASIC2.55□□□□□ -2
CX3CR1P49238 RNU6-270P-201ENST00000364131 105 ntBASIC2.55□□□□□ -2
CX3CR1P49238 Y_RNA.578-201ENST00000390903 88 ntBASIC2.55□□□□□ -2
CX3CR1P49238 SNORA48.7-201ENST00000391302 135 ntBASIC2.55□□□□□ -2
CX3CR1P49238 CCDC58P2-201ENST00000417131 366 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC007435.1-201ENST00000421086 415 ntBASIC2.55□□□□□ -2
CX3CR1P49238 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.55□□□□□ -2
CX3CR1P49238 AL139281.1-201ENST00000422120 335 ntBASIC2.55□□□□□ -2
CX3CR1P49238 RPL7P37-201ENST00000425095 738 ntBASIC2.55□□□□□ -2
CX3CR1P49238 GTF2IP3-201ENST00000433887 494 ntBASIC2.55□□□□□ -2
CX3CR1P49238 SDCBPP1-201ENST00000440192 890 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.55□□□□□ -2
CX3CR1P49238 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.55□□□□□ -2
CX3CR1P49238 MTND5P1-201ENST00000445440 1375 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC009237.8-201ENST00000445492 379 ntBASIC2.55□□□□□ -2
CX3CR1P49238 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.55□□□□□ -2
CX3CR1P49238 TRGVB-201ENST00000453257 471 ntBASIC2.55□□□□□ -2
CX3CR1P49238 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.55□□□□□ -2
CX3CR1P49238 RPL7P49-201ENST00000471402 708 ntBASIC2.55□□□□□ -2
CX3CR1P49238 HSPE1P6-201ENST00000479457 291 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.55□□□□□ -2
CX3CR1P49238 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.55□□□□□ -2
CX3CR1P49238 HMGB1P28-201ENST00000507778 552 ntBASIC2.55□□□□□ -2
CX3CR1P49238 MTCYBP16-201ENST00000509187 1129 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC010374.2-201ENST00000512933 535 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC093677.1-201ENST00000514414 678 ntBASIC2.55□□□□□ -2
CX3CR1P49238 RNU6-1225P-201ENST00000516336 65 ntBASIC2.55□□□□□ -2
CX3CR1P49238 SNORA31.21-201ENST00000517180 77 ntBASIC2.55□□□□□ -2
CX3CR1P49238 SNORA31.22-201ENST00000517204 135 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC091163.3-201ENST00000518269 1144 ntBASIC2.55□□□□□ -2
CX3CR1P49238 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.55□□□□□ -2
CX3CR1P49238 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.55□□□□□ -2
CX3CR1P49238 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.55□□□□□ -2
CX3CR1P49238 AC087373.1-201ENST00000524920 491 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.55□□□□□ -2
CX3CR1P49238 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.55□□□□□ -2
CX3CR1P49238 HMGB1P14-201ENST00000557424 591 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.55□□□□□ -2
CX3CR1P49238 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.55□□□□□ -2
CX3CR1P49238 AC069431.2-201ENST00000604149 1099 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AL390208.1-201ENST00000605885 644 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AC018645.2-201ENST00000609151 472 ntBASIC2.55□□□□□ -2
CX3CR1P49238 AL109620.1-201ENST00000618738 1197 ntBASIC2.55□□□□□ -2
CX3CR1P49238 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.55□□□□□ -2
CX3CR1P49238 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.55□□□□□ -2
CX3CR1P49238 AC002064.3-201ENST00000623448 346 ntBASIC2.55□□□□□ -2
CX3CR1P49238 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.55□□□□□ -2
CX3CR1P49238 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CX3CR1P49238 AC010680.1-201ENST00000590024 3590 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.54□□□□□ -2
CX3CR1P49238 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CX3CR1P49238 RNU1-35P-201ENST00000362782 153 ntBASIC2.54□□□□□ -2
CX3CR1P49238 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.54□□□□□ -2
CX3CR1P49238 Y_RNA.472-201ENST00000384322 102 ntBASIC2.54□□□□□ -2
CX3CR1P49238 MIR325-201ENST00000385260 98 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.54□□□□□ -2
CX3CR1P49238 MTND4P3-201ENST00000417829 541 ntBASIC2.54□□□□□ -2
CX3CR1P49238 MTCO2P5-201ENST00000422621 426 ntBASIC2.54□□□□□ -2
CX3CR1P49238 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.54□□□□□ -2
CX3CR1P49238 AC022018.1-201ENST00000430685 241 ntBASIC2.54□□□□□ -2
CX3CR1P49238 RNF2P1-201ENST00000442955 1010 ntBASIC2.54□□□□□ -2
CX3CR1P49238 AL358232.1-201ENST00000448030 501 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms