Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.75□□□□□ -2.13
RPL28P46779 AC012321.1-201ENST00000561622 1588 ntBASIC1.75□□□□□ -2.13
RPL28P46779 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.75□□□□□ -2.13
RPL28P46779 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
RPL28P46779 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RPL28P46779 AC109315.1-201ENST00000584143 1347 ntBASIC1.74□□□□□ -2.13
RPL28P46779 RNU6-461P-201ENST00000364195 107 ntBASIC1.74□□□□□ -2.13
RPL28P46779 SNORA68.1-201ENST00000364537 132 ntBASIC1.74□□□□□ -2.13
RPL28P46779 RNU6-657P-201ENST00000383904 107 ntBASIC1.74□□□□□ -2.13
RPL28P46779 RNU6-1035P-201ENST00000384477 107 ntBASIC1.74□□□□□ -2.13
RPL28P46779 SNORA80E-201ENST00000384744 137 ntBASIC1.74□□□□□ -2.13
RPL28P46779 AL133264.1-201ENST00000407157 562 ntBASIC1.74□□□□□ -2.13
RPL28P46779 EEF1A1P41-201ENST00000414667 207 ntBASIC1.74□□□□□ -2.13
RPL28P46779 RPLP0P7-201ENST00000416050 667 ntBASIC1.74□□□□□ -2.13
RPL28P46779 BOLA3P4-201ENST00000418151 400 ntBASIC1.74□□□□□ -2.13
RPL28P46779 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL28P46779 SUMO1P4-201ENST00000429430 302 ntBASIC1.74□□□□□ -2.13
RPL28P46779 AC009296.1-201ENST00000443146 155 ntBASIC1.74□□□□□ -2.13
RPL28P46779 USP9YP34-201ENST00000453983 808 ntBASIC1.74□□□□□ -2.13
RPL28P46779 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.74□□□□□ -2.13
RPL28P46779 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL28P46779 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.74□□□□□ -2.13
RPL28P46779 KLRA1P-201ENST00000503499 986 ntBASIC1.74□□□□□ -2.13
RPL28P46779 COX7A2P2-201ENST00000505291 250 ntBASIC1.74□□□□□ -2.13
RPL28P46779 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.74□□□□□ -2.13
RPL28P46779 AC025768.1-201ENST00000510057 267 ntBASIC1.74□□□□□ -2.13
RPL28P46779 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.74□□□□□ -2.13
RPL28P46779 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL28P46779 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.74□□□□□ -2.13
RPL28P46779 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL28P46779 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.74□□□□□ -2.13
RPL28P46779 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RPL28P46779 AC090502.2-201ENST00000549267 280 ntBASIC1.74□□□□□ -2.13
RPL28P46779 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.74□□□□□ -2.13
RPL28P46779 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RPL28P46779 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.74□□□□□ -2.13
RPL28P46779 AC068135.2-201ENST00000569293 1028 ntBASIC1.74□□□□□ -2.13
RPL28P46779 AC009163.5-201ENST00000575421 637 ntBASIC1.74□□□□□ -2.13
RPL28P46779 MIR4666A-201ENST00000580160 79 ntBASIC1.74□□□□□ -2.13
RPL28P46779 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL28P46779 AC024153.1-201ENST00000603103 365 ntBASIC1.74□□□□□ -2.13
RPL28P46779 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.74□□□□□ -2.13
RPL28P46779 AC100814.1-201ENST00000606963 623 ntBASIC1.74□□□□□ -2.13
RPL28P46779 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.74□□□□□ -2.13
RPL28P46779 AC004852.3-201ENST00000614131 326 ntBASIC1.74□□□□□ -2.13
RPL28P46779 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RPL28P46779 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
RPL28P46779 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
RPL28P46779 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
RPL28P46779 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.73□□□□□ -2.13
RPL28P46779 RNU6-549P-201ENST00000384433 107 ntBASIC1.73□□□□□ -2.13
RPL28P46779 MIR217-201ENST00000384817 110 ntBASIC1.73□□□□□ -2.13
RPL28P46779 MIR144-201ENST00000384886 86 ntBASIC1.73□□□□□ -2.13
RPL28P46779 U3.20-201ENST00000390909 217 ntBASIC1.73□□□□□ -2.13
RPL28P46779 RNA5SP210-201ENST00000391034 120 ntBASIC1.73□□□□□ -2.13
RPL28P46779 NPM1P10-201ENST00000398310 865 ntBASIC1.73□□□□□ -2.13
RPL28P46779 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPL28P46779 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL28P46779 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL28P46779 NDUFB4P7-201ENST00000423198 363 ntBASIC1.73□□□□□ -2.13
RPL28P46779 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.73□□□□□ -2.13
RPL28P46779 AC006946.1-201ENST00000429106 328 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AC009237.8-201ENST00000445492 379 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPL28P46779 RSL24D1P3-201ENST00000449255 495 ntBASIC1.73□□□□□ -2.13
RPL28P46779 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.73□□□□□ -2.13
RPL28P46779 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.73□□□□□ -2.13
RPL28P46779 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL28P46779 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPL28P46779 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.73□□□□□ -2.13
RPL28P46779 AC147055.4-201ENST00000504399 745 ntBASIC1.73□□□□□ -2.13
RPL28P46779 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL28P46779 AC091860.1-201ENST00000505723 432 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AC113155.1-201ENST00000511141 769 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AC022483.1-201ENST00000514020 567 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AC091826.1-201ENST00000514065 313 ntBASIC1.73□□□□□ -2.13
RPL28P46779 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.73□□□□□ -2.13
RPL28P46779 RNA5SP82-201ENST00000516707 92 ntBASIC1.73□□□□□ -2.13
RPL28P46779 SNORA48.10-201ENST00000516965 160 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.73□□□□□ -2.13
RPL28P46779 AC087241.2-201ENST00000535801 324 ntBASIC1.73□□□□□ -2.13
RPL28P46779 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPL28P46779 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL28P46779 PRELID2P1-201ENST00000552837 301 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL28P46779 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.73□□□□□ -2.13
RPL28P46779 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.73□□□□□ -2.13
RPL28P46779 AL671309.1-201ENST00000603750 544 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AC013553.2-201ENST00000604244 589 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AC091946.2-201ENST00000606105 291 ntBASIC1.73□□□□□ -2.13
RPL28P46779 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AL442067.2-201ENST00000614033 363 ntBASIC1.73□□□□□ -2.13
RPL28P46779 AC006213.4-201ENST00000616184 634 ntBASIC1.73□□□□□ -2.13
RPL28P46779 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
RPL28P46779 AC010872.1-201ENST00000624225 675 ntBASIC1.73□□□□□ -2.13
RPL28P46779 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.73□□□□□ -2.13
RPL28P46779 OR5H6-203ENST00000642105 978 ntBASIC1.73□□□□□ -2.13
RPL28P46779 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPL28P46779 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.73□□□□□ -2.13
RPL28P46779 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms