Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC108747.1-201ENST00000609508 535 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC093838.1-201ENST00000613014 469 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AL450472.3-201ENST00000615578 367 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC072046.2-201ENST00000618366 268 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC243312.2-201ENST00000623340 601 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC091953.2-201ENST00000623979 160 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC019226.1-201ENST00000625666 515 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC084035.1-201ENST00000634543 607 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 MIR4275-201ENST00000636486 87 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC1P41238 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBEC1P41238 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 AC092447.7-201ENST00000422212 1621 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
APOBEC1P41238 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
APOBEC1P41238 DDX10P1-201ENST00000448545 1933 ntBASIC3.4□□□□□ -1.86
APOBEC1P41238 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
APOBEC1P41238 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.4□□□□□ -1.86
APOBEC1P41238 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
APOBEC1P41238 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.86
APOBEC1P41238 HSPA8P1-201ENST00000425843 1833 ntBASIC3.4□□□□□ -1.86
APOBEC1P41238 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
APOBEC1P41238 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.4□□□□□ -1.86
APOBEC1P41238 SNORA31-201ENST00000362607 130 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 U8.3-201ENST00000363321 132 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 SNORA57.1-201ENST00000391227 145 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AL138878.1-201ENST00000405131 347 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 HSPE1P8-201ENST00000406997 288 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.4□□□□□ -1.87
APOBEC1P41238 RNU2-62P-201ENST00000410868 191 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.4□□□□□ -1.87
APOBEC1P41238 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.4□□□□□ -1.87
APOBEC1P41238 AL139247.1-201ENST00000422768 325 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 DUTP6-201ENST00000425573 462 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 MTCO1P39-201ENST00000426148 480 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.4□□□□□ -1.87
APOBEC1P41238 AC119618.1-201ENST00000434191 222 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AC009961.2-201ENST00000435771 251 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 ARPC3P1-201ENST00000437218 533 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.4□□□□□ -1.87
APOBEC1P41238 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.4□□□□□ -1.87
APOBEC1P41238 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.4□□□□□ -1.87
APOBEC1P41238 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.4□□□□□ -1.87
APOBEC1P41238 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.4□□□□□ -1.87
APOBEC1P41238 snoU13.4-201ENST00000458916 104 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AC135721.1-201ENST00000497954 479 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.4□□□□□ -1.87
APOBEC1P41238 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.4□□□□□ -1.87
APOBEC1P41238 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.4□□□□□ -1.87
APOBEC1P41238 SCARNA14-201ENST00000516903 136 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.4□□□□□ -1.87
APOBEC1P41238 AC107934.1-201ENST00000522215 217 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
APOBEC1P41238 DEFB108D-201ENST00000527787 222 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AL133153.1-201ENST00000557756 303 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 HSPE1P5-201ENST00000561489 272 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 MIR5187-201ENST00000583479 76 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AC068790.2-201ENST00000602601 557 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AC073648.5-201ENST00000603502 305 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AL136363.2-201ENST00000604173 851 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AL391813.2-201ENST00000609113 322 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AC245517.5-201ENST00000611529 162 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AC091834.1-201ENST00000614543 472 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AL603758.1-201ENST00000618654 241 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AL360181.4-201ENST00000621752 134 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOBEC1P41238 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOBEC1P41238 TAB3P1-202ENST00000452645 1634 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AC024560.2-201ENST00000507981 1497 ntBASIC3.4□□□□□ -1.87
APOBEC1P41238 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOBEC1P41238 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
APOBEC1P41238 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.39□□□□□ -1.87
APOBEC1P41238 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBEC1P41238 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBEC1P41238 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBEC1P41238 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
APOBEC1P41238 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBEC1P41238 RNA5SP515-201ENST00000364570 118 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 RNU5A-6P-201ENST00000384136 116 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 RPL32P23-201ENST00000397237 405 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 RPS3AP24-201ENST00000407896 734 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 SNORA57.3-201ENST00000411095 141 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBEC1P41238 ELOCP17-201ENST00000414751 326 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBEC1P41238 RPL21P66-201ENST00000426566 466 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 AC079780.1-201ENST00000428259 207 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBEC1P41238 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBEC1P41238 AC090774.1-201ENST00000435925 246 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 MTND1P34-201ENST00000438556 671 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 RPS29P7-201ENST00000439662 171 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 AC093156.1-201ENST00000440382 670 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBEC1P41238 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBEC1P41238 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.39□□□□□ -1.87
APOBEC1P41238 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms