Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RPL7P46-201ENST00000425129 740 ntBASIC2.58□□□□□ -2
SCN4AP35499 AL009174.1-201ENST00000426577 416 ntBASIC2.58□□□□□ -2
SCN4AP35499 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.58□□□□□ -2
SCN4AP35499 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.58□□□□□ -2
SCN4AP35499 snoU13.7-201ENST00000459220 104 ntBASIC2.58□□□□□ -2
SCN4AP35499 SNORD13-201ENST00000459299 104 ntBASIC2.58□□□□□ -2
SCN4AP35499 AC146507.1-201ENST00000468335 354 ntBASIC2.58□□□□□ -2
SCN4AP35499 AC108729.2-201ENST00000476543 840 ntBASIC2.58□□□□□ -2
SCN4AP35499 RPL30P11-201ENST00000495304 339 ntBASIC2.58□□□□□ -2
SCN4AP35499 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.58□□□□□ -2
SCN4AP35499 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.58□□□□□ -2
SCN4AP35499 AC104108.1-201ENST00000509930 412 ntBASIC2.58□□□□□ -2
SCN4AP35499 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.58□□□□□ -2
SCN4AP35499 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.58□□□□□ -2
SCN4AP35499 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.58□□□□□ -2
SCN4AP35499 MIR4789-201ENST00000577469 82 ntBASIC2.58□□□□□ -2
SCN4AP35499 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.58□□□□□ -2
SCN4AP35499 AC105429.2-201ENST00000610567 517 ntBASIC2.58□□□□□ -2
SCN4AP35499 MFSD8-245ENST00000641743 948 ntBASIC2.58□□□□□ -2
SCN4AP35499 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SCN4AP35499 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SCN4AP35499 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.58□□□□□ -2
SCN4AP35499 MTCO1P6-201ENST00000481192 1384 ntBASIC2.58□□□□□ -2
SCN4AP35499 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SCN4AP35499 RNU6-1339P-201ENST00000363574 91 ntBASIC2.58□□□□□ -2
SCN4AP35499 SNORD56.4-201ENST00000363883 71 ntBASIC2.58□□□□□ -2
SCN4AP35499 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SCN4AP35499 SNORD21-201ENST00000383953 95 ntBASIC2.58□□□□□ -2
SCN4AP35499 MIR583-201ENST00000384846 75 ntBASIC2.58□□□□□ -2
SCN4AP35499 SNORA48.3-201ENST00000391081 134 ntBASIC2.58□□□□□ -2
SCN4AP35499 LUZP4P1-201ENST00000415420 344 ntBASIC2.58□□□□□ -2
SCN4AP35499 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.58□□□□□ -2
SCN4AP35499 PTP4A1P7-201ENST00000423476 514 ntBASIC2.58□□□□□ -2
SCN4AP35499 AL445646.1-201ENST00000431784 216 ntBASIC2.58□□□□□ -2
SCN4AP35499 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.58□□□□□ -2
SCN4AP35499 AC017099.1-201ENST00000448261 1028 ntBASIC2.58□□□□□ -2
SCN4AP35499 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.58□□□□□ -2
SCN4AP35499 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.58□□□□□ -2
SCN4AP35499 KLRA1P-201ENST00000503499 986 ntBASIC2.58□□□□□ -2
SCN4AP35499 SNX5P1-201ENST00000505757 1041 ntBASIC2.58□□□□□ -2
SCN4AP35499 MTCO3P27-201ENST00000514397 196 ntBASIC2.58□□□□□ -2
SCN4AP35499 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.58□□□□□ -2
SCN4AP35499 RN7SKP277-201ENST00000516895 283 ntBASIC2.58□□□□□ -2
SCN4AP35499 AC010376.1-201ENST00000522101 334 ntBASIC2.58□□□□□ -2
SCN4AP35499 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.58□□□□□ -2
SCN4AP35499 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.58□□□□□ -2
SCN4AP35499 AC012182.1-201ENST00000570133 895 ntBASIC2.58□□□□□ -2
SCN4AP35499 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.58□□□□□ -2
SCN4AP35499 AC091834.1-201ENST00000614543 472 ntBASIC2.58□□□□□ -2
SCN4AP35499 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SCN4AP35499 MTND5P11-201ENST00000511037 1812 ntBASIC2.58□□□□□ -2
SCN4AP35499 DCAF13P1-201ENST00000495256 1330 ntBASIC2.57□□□□□ -2
SCN4AP35499 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.57□□□□□ -2
SCN4AP35499 RN7SKP226-201ENST00000364912 300 ntBASIC2.57□□□□□ -2
SCN4AP35499 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.57□□□□□ -2
SCN4AP35499 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.57□□□□□ -2
SCN4AP35499 UBE2D3P3-201ENST00000426992 425 ntBASIC2.57□□□□□ -2
SCN4AP35499 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.57□□□□□ -2
SCN4AP35499 TVP23BP2-201ENST00000455082 615 ntBASIC2.57□□□□□ -2
SCN4AP35499 SNRPGP9-201ENST00000456025 225 ntBASIC2.57□□□□□ -2
SCN4AP35499 AC104689.1-201ENST00000473356 768 ntBASIC2.57□□□□□ -2
SCN4AP35499 AC092451.1-201ENST00000480211 153 ntBASIC2.57□□□□□ -2
SCN4AP35499 AC008427.1-201ENST00000503102 655 ntBASIC2.57□□□□□ -2
SCN4AP35499 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.57□□□□□ -2
SCN4AP35499 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.57□□□□□ -2
SCN4AP35499 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.57□□□□□ -2
SCN4AP35499 HMGB1P1-201ENST00000522557 636 ntBASIC2.57□□□□□ -2
SCN4AP35499 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.57□□□□□ -2
SCN4AP35499 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.57□□□□□ -2
SCN4AP35499 AL391813.2-201ENST00000609113 322 ntBASIC2.57□□□□□ -2
SCN4AP35499 AC011890.2-201ENST00000613393 294 ntBASIC2.57□□□□□ -2
SCN4AP35499 MIR8084-201ENST00000614105 89 ntBASIC2.57□□□□□ -2
SCN4AP35499 AC017104.5-201ENST00000637647 639 ntBASIC2.57□□□□□ -2
SCN4AP35499 FAM157B-203ENST00000639350 358 ntBASIC2.57□□□□□ -2
SCN4AP35499 AL049737.1-201ENST00000413920 1403 ntBASIC2.57□□□□□ -2
SCN4AP35499 BTBD10P2-201ENST00000404779 676 ntBASIC2.56□□□□□ -2
SCN4AP35499 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.56□□□□□ -2
SCN4AP35499 AL606495.1-201ENST00000422100 813 ntBASIC2.56□□□□□ -2
SCN4AP35499 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.56□□□□□ -2
SCN4AP35499 ELOCP13-201ENST00000443934 329 ntBASIC2.56□□□□□ -2
SCN4AP35499 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.56□□□□□ -2
SCN4AP35499 AL133393.1-201ENST00000603277 287 ntBASIC2.56□□□□□ -2
SCN4AP35499 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.56□□□□□ -2
SCN4AP35499 AL356118.1-201ENST00000635272 1078 ntBASIC2.56□□□□□ -2
SCN4AP35499 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SCN4AP35499 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SCN4AP35499 RNU6-251P-201ENST00000363235 104 ntBASIC2.56□□□□□ -2
SCN4AP35499 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.56□□□□□ -2
SCN4AP35499 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCN4AP35499 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.56□□□□□ -2
SCN4AP35499 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.56□□□□□ -2
SCN4AP35499 MTND1P33-201ENST00000446251 917 ntBASIC2.56□□□□□ -2
SCN4AP35499 CDC42P1-201ENST00000456658 548 ntBASIC2.56□□□□□ -2
SCN4AP35499 snoU109.3-201ENST00000459477 145 ntBASIC2.56□□□□□ -2
SCN4AP35499 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.56□□□□□ -2
SCN4AP35499 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.56□□□□□ -2
SCN4AP35499 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
SCN4AP35499 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.56□□□□□ -2
SCN4AP35499 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.56□□□□□ -2
SCN4AP35499 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms