Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXD13P35453 RPL21P12-201ENST00000559810 515 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD13P35453 AC011260.1-201ENST00000578420 472 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 MIR4429-201ENST00000580105 73 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC022146.1-201ENST00000595307 847 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AL109653.1-201ENST00000603091 248 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD13P35453 AC103710.4-201ENST00000609301 899 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AL592295.2-201ENST00000612578 206 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC110801.1-201ENST00000623590 212 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC091965.5-201ENST00000624785 342 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 AC019226.1-201ENST00000625666 515 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 U6.105-201ENST00000637379 88 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 OR8B1P-202ENST00000641132 1178 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD13P35453 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD13P35453 AC015813.6-201ENST00000624409 5808 ntBASIC3.69□□□□□ -1.82
HOXD13P35453 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD13P35453 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD13P35453 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD13P35453 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD13P35453 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HOXD13P35453 RNU5E-8P-201ENST00000363502 116 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 RNU1-33P-201ENST00000364249 162 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 SNORA1.3-201ENST00000384676 136 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 MIR200C-201ENST00000384980 68 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 U3.42-201ENST00000408746 214 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD13P35453 AL356968.1-201ENST00000416622 474 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD13P35453 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD13P35453 BX679664.1-201ENST00000434429 253 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD13P35453 TXNP1-201ENST00000441872 371 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD13P35453 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD13P35453 MTND2P24-201ENST00000453434 806 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD13P35453 RNA5SP310-201ENST00000459084 116 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AC012181.1-201ENST00000479895 423 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AC109464.2-201ENST00000510242 943 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.68□□□□□ -1.82
HOXD13P35453 RNU6-1129P-201ENST00000515964 104 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 RNU6-840P-201ENST00000517275 65 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD13P35453 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD13P35453 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD13P35453 AC008962.1-201ENST00000605729 304 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 U3.45-201ENST00000607547 219 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AC009570.1-201ENST00000609599 745 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 MIR6076-201ENST00000617521 113 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AC007671.2-201ENST00000637344 619 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD13P35453 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD13P35453 ZNF826P-207ENST00000622273 1910 ntBASIC3.68□□□□□ -1.82
HOXD13P35453 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXD13P35453 MTND4P16-201ENST00000466108 1367 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD13P35453 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXD13P35453 MIR449B-201ENST00000384995 97 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 AC126124.2-201ENST00000413542 321 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXD13P35453 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXD13P35453 AC233728.2-201ENST00000425348 757 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD13P35453 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXD13P35453 ARF4P2-201ENST00000430209 526 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXD13P35453 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXD13P35453 AC098862.1-201ENST00000504991 413 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXD13P35453 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXD13P35453 FCF1P8-201ENST00000510322 597 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 MTND1P22-201ENST00000510572 951 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXD13P35453 RNU6-798P-201ENST00000516912 103 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.67□□□□□ -1.82
HOXD13P35453 HIGD1AP10-201ENST00000527837 282 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 AL163153.1-201ENST00000554223 283 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXD13P35453 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.67□□□□□ -1.82
HOXD13P35453 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXD13P35453 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HOXD13P35453 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD13P35453 AP000254.1-201ENST00000609934 520 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 MIR8058-201ENST00000615737 89 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 AC006111.3-201ENST00000622137 383 ntBASIC3.67□□□□□ -1.82
HOXD13P35453 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD13P35453 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD13P35453 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXD13P35453 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXD13P35453 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
HOXD13P35453 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
HOXD13P35453 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXD13P35453 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXD13P35453 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXD13P35453 RNU6-769P-201ENST00000384407 104 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms