Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS2P33552 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.55□□□□□ -2.16
CKS2P33552 AC008749.1-201ENST00000597650 306 ntBASIC1.55□□□□□ -2.16
CKS2P33552 AC012443.1-201ENST00000605605 231 ntBASIC1.55□□□□□ -2.16
CKS2P33552 OR10AB1P-201ENST00000609613 938 ntBASIC1.55□□□□□ -2.16
CKS2P33552 AP000254.1-201ENST00000609934 520 ntBASIC1.55□□□□□ -2.16
CKS2P33552 uc_338.20-201ENST00000621563 178 ntBASIC1.55□□□□□ -2.16
CKS2P33552 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
CKS2P33552 AL137790.1-201ENST00000634283 177 ntBASIC1.55□□□□□ -2.16
CKS2P33552 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS2P33552 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
CKS2P33552 AC046144.1-201ENST00000478559 1853 ntBASIC1.54□□□□□ -2.16
CKS2P33552 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CKS2P33552 AL109809.4-201ENST00000603520 2185 ntBASIC1.54□□□□□ -2.16
CKS2P33552 HMGB1P5-201ENST00000255320 642 ntBASIC1.54□□□□□ -2.16
CKS2P33552 RNU6-173P-201ENST00000364215 104 ntBASIC1.54□□□□□ -2.16
CKS2P33552 RNU6-444P-201ENST00000383988 108 ntBASIC1.54□□□□□ -2.16
CKS2P33552 RNU6-1151P-201ENST00000384684 107 ntBASIC1.54□□□□□ -2.16
CKS2P33552 MIR221-201ENST00000385135 110 ntBASIC1.54□□□□□ -2.16
CKS2P33552 RNU6-564P-201ENST00000410983 104 ntBASIC1.54□□□□□ -2.16
CKS2P33552 RNU6-272P-201ENST00000411028 104 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.54□□□□□ -2.16
CKS2P33552 TATDN1P1-201ENST00000414123 891 ntBASIC1.54□□□□□ -2.16
CKS2P33552 UBE2V1P9-201ENST00000414760 368 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.54□□□□□ -2.16
CKS2P33552 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.54□□□□□ -2.16
CKS2P33552 AC098614.2-201ENST00000426040 255 ntBASIC1.54□□□□□ -2.16
CKS2P33552 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.54□□□□□ -2.16
CKS2P33552 AL035410.1-201ENST00000427409 427 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC090774.1-201ENST00000435925 246 ntBASIC1.54□□□□□ -2.16
CKS2P33552 UBE2FP3-201ENST00000436366 524 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC018634.1-201ENST00000437554 401 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AL451074.3-201ENST00000437709 472 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC000041.1-201ENST00000439655 175 ntBASIC1.54□□□□□ -2.16
CKS2P33552 FGF7P5-201ENST00000441829 291 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AL591719.1-201ENST00000444669 744 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AL589880.1-201ENST00000448271 287 ntBASIC1.54□□□□□ -2.16
CKS2P33552 S100A11P2-201ENST00000467589 312 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.54□□□□□ -2.16
CKS2P33552 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.54□□□□□ -2.16
CKS2P33552 AC008413.1-201ENST00000511864 177 ntBASIC1.54□□□□□ -2.16
CKS2P33552 SNORA31.18-201ENST00000517043 134 ntBASIC1.54□□□□□ -2.16
CKS2P33552 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CKS2P33552 AL138976.2-201ENST00000563989 694 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC068135.2-201ENST00000569293 1028 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.54□□□□□ -2.16
CKS2P33552 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.54□□□□□ -2.16
CKS2P33552 MIR4448-201ENST00000584360 86 ntBASIC1.54□□□□□ -2.16
CKS2P33552 VN1R90P-201ENST00000595717 726 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.54□□□□□ -2.16
CKS2P33552 OR2AS2P-201ENST00000606902 342 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC004852.3-201ENST00000614131 326 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC025016.1-201ENST00000616746 682 ntBASIC1.54□□□□□ -2.16
CKS2P33552 MIR6810-201ENST00000622701 70 ntBASIC1.54□□□□□ -2.16
CKS2P33552 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.54□□□□□ -2.16
CKS2P33552 TPTE2P4-201ENST00000258589 1605 ntBASIC1.54□□□□□ -2.16
CKS2P33552 AC004944.1-201ENST00000517807 3059 ntBASIC1.53□□□□□ -2.16
CKS2P33552 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CKS2P33552 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CKS2P33552 SNORA38-201ENST00000363946 132 ntBASIC1.53□□□□□ -2.16
CKS2P33552 RN7SKP226-201ENST00000364912 300 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AL445529.1-201ENST00000398713 389 ntBASIC1.53□□□□□ -2.16
CKS2P33552 RNU6-920P-201ENST00000410926 92 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.53□□□□□ -2.16
CKS2P33552 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.53□□□□□ -2.16
CKS2P33552 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.53□□□□□ -2.16
CKS2P33552 USP12PX-201ENST00000432383 1057 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.53□□□□□ -2.16
CKS2P33552 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC1.53□□□□□ -2.16
CKS2P33552 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.53□□□□□ -2.16
CKS2P33552 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.53□□□□□ -2.16
CKS2P33552 ARF4P4-201ENST00000439608 520 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.53□□□□□ -2.16
CKS2P33552 GPM6BP3-201ENST00000442797 145 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.53□□□□□ -2.16
CKS2P33552 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.53□□□□□ -2.16
CKS2P33552 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
CKS2P33552 SNORA84-201ENST00000459229 133 ntBASIC1.53□□□□□ -2.16
CKS2P33552 RNU7-23P-201ENST00000459465 62 ntBASIC1.53□□□□□ -2.16
CKS2P33552 RN7SL636P-201ENST00000497504 294 ntBASIC1.53□□□□□ -2.16
CKS2P33552 MTCO2P9-201ENST00000503214 694 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.53□□□□□ -2.16
CKS2P33552 HMGB1P47-201ENST00000511281 589 ntBASIC1.53□□□□□ -2.16
CKS2P33552 RN7SKP132-201ENST00000516001 208 ntBASIC1.53□□□□□ -2.16
CKS2P33552 RNU6-928P-201ENST00000516876 104 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AC113192.3-201ENST00000529152 742 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AC002487.1-201ENST00000604565 994 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AC025594.3-201ENST00000613068 790 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AL391597.1-201ENST00000618707 694 ntBASIC1.53□□□□□ -2.16
CKS2P33552 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
CKS2P33552 AL162373.1-201ENST00000620433 407 ntBASIC1.53□□□□□ -2.16
CKS2P33552 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.53□□□□□ -2.16
CKS2P33552 MIR7515-201ENST00000637837 67 ntBASIC1.53□□□□□ -2.16
CKS2P33552 CENPCP1-201ENST00000533085 2578 ntBASIC1.53□□□□□ -2.17
CKS2P33552 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CKS2P33552 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
CKS2P33552 RNU6-543P-201ENST00000362576 108 ntBASIC1.52□□□□□ -2.17
CKS2P33552 Y_RNA.126-201ENST00000363382 111 ntBASIC1.52□□□□□ -2.17
CKS2P33552 SUMO2P12-201ENST00000405924 140 ntBASIC1.52□□□□□ -2.17
CKS2P33552 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms