Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CIITAP33076 AC093536.2-201ENST00000565257 1406 ntBASIC4.04□□□□□ -1.76
CIITAP33076 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CIITAP33076 AL356274.2-201ENST00000624379 3752 ntBASIC4.03□□□□□ -1.76
CIITAP33076 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.03□□□□□ -1.76
CIITAP33076 SNORA51.2-201ENST00000364595 132 ntBASIC4.03□□□□□ -1.76
CIITAP33076 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 RNU6-809P-201ENST00000384461 107 ntBASIC4.03□□□□□ -1.76
CIITAP33076 Y_RNA.608-201ENST00000410647 95 ntBASIC4.03□□□□□ -1.76
CIITAP33076 RN7SKP53-201ENST00000411337 315 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AMD1P2-201ENST00000412936 992 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.03□□□□□ -1.76
CIITAP33076 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 AC017079.2-201ENST00000416102 485 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AIMP1P1-201ENST00000418670 937 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AC006989.1-201ENST00000427212 131 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.03□□□□□ -1.76
CIITAP33076 BX890604.2-201ENST00000427883 474 ntBASIC4.03□□□□□ -1.76
CIITAP33076 ATP5JP1-201ENST00000431631 322 ntBASIC4.03□□□□□ -1.76
CIITAP33076 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.03□□□□□ -1.76
CIITAP33076 RPL23AP74-201ENST00000437246 471 ntBASIC4.03□□□□□ -1.76
CIITAP33076 MTCO2P3-201ENST00000442543 421 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.03□□□□□ -1.76
CIITAP33076 AP000542.1-201ENST00000448473 371 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AL590365.1-201ENST00000450788 243 ntBASIC4.03□□□□□ -1.76
CIITAP33076 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.03□□□□□ -1.76
CIITAP33076 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.03□□□□□ -1.76
CIITAP33076 IGKV2D-23-201ENST00000518179 286 ntBASIC4.03□□□□□ -1.76
CIITAP33076 IGKV2D-36-201ENST00000518643 226 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AP006245.1-201ENST00000522549 120 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AP003122.4-201ENST00000530980 758 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 OR5B10P-201ENST00000532869 642 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.03□□□□□ -1.76
CIITAP33076 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.03□□□□□ -1.76
CIITAP33076 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.03□□□□□ -1.76
CIITAP33076 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.03□□□□□ -1.76
CIITAP33076 EEF1B2P4-201ENST00000551398 348 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AC009977.1-201ENST00000586015 570 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AC112191.3-201ENST00000604371 277 ntBASIC4.03□□□□□ -1.76
CIITAP33076 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AC009318.4-201ENST00000620496 486 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AL160394.1-201ENST00000624765 724 ntBASIC4.03□□□□□ -1.76
CIITAP33076 CYP3A51P-201ENST00000633513 256 ntBASIC4.03□□□□□ -1.76
CIITAP33076 AC244205.2-202ENST00000635781 342 ntBASIC4.03□□□□□ -1.76
CIITAP33076 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CIITAP33076 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 MFSD8-233ENST00000641482 4860 ntBASIC4.03□□□□□ -1.76
CIITAP33076 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CIITAP33076 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CIITAP33076 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.03□□□□□ -1.77
CIITAP33076 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.02□□□□□ -1.77
CIITAP33076 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CIITAP33076 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 CCT4P2-201ENST00000233836 1548 ntBASIC4.02□□□□□ -1.77
CIITAP33076 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.02□□□□□ -1.77
CIITAP33076 RNU6-730P-201ENST00000383954 104 ntBASIC4.02□□□□□ -1.77
CIITAP33076 RNU6-533P-201ENST00000384144 107 ntBASIC4.02□□□□□ -1.77
CIITAP33076 RNU6-761P-201ENST00000384148 107 ntBASIC4.02□□□□□ -1.77
CIITAP33076 Y_RNA.493-201ENST00000384422 102 ntBASIC4.02□□□□□ -1.77
CIITAP33076 MIR23B-201ENST00000384832 97 ntBASIC4.02□□□□□ -1.77
CIITAP33076 MIR607-201ENST00000385241 96 ntBASIC4.02□□□□□ -1.77
CIITAP33076 Y_RNA.582-201ENST00000391023 95 ntBASIC4.02□□□□□ -1.77
CIITAP33076 RNA5SP171-201ENST00000391071 115 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AL031679.1-201ENST00000400616 525 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AL391417.1-201ENST00000404100 426 ntBASIC4.02□□□□□ -1.77
CIITAP33076 USP9YP13-201ENST00000417797 480 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AC006548.1-201ENST00000427470 102 ntBASIC4.02□□□□□ -1.77
CIITAP33076 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.02□□□□□ -1.77
CIITAP33076 HMGN2P31-201ENST00000432430 273 ntBASIC4.02□□□□□ -1.77
CIITAP33076 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.02□□□□□ -1.77
CIITAP33076 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.02□□□□□ -1.77
CIITAP33076 RPL7P36-201ENST00000444633 681 ntBASIC4.02□□□□□ -1.77
CIITAP33076 NPM1P49-201ENST00000448027 714 ntBASIC4.02□□□□□ -1.77
CIITAP33076 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.02□□□□□ -1.77
CIITAP33076 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.02□□□□□ -1.77
CIITAP33076 ANP32BP2-201ENST00000454525 545 ntBASIC4.02□□□□□ -1.77
CIITAP33076 U3.44-201ENST00000458938 192 ntBASIC4.02□□□□□ -1.77
CIITAP33076 RN7SL594P-201ENST00000470590 287 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.02□□□□□ -1.77
CIITAP33076 AC023598.1-201ENST00000472521 361 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AC084357.1-201ENST00000473404 255 ntBASIC4.02□□□□□ -1.77
CIITAP33076 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.02□□□□□ -1.77
CIITAP33076 RPL31P13-201ENST00000484151 370 ntBASIC4.02□□□□□ -1.77
CIITAP33076 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.02□□□□□ -1.77
CIITAP33076 AC109927.2-201ENST00000506416 303 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.02□□□□□ -1.77
CIITAP33076 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.02□□□□□ -1.77
CIITAP33076 RN7SKP298-201ENST00000515950 94 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms