Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC017015.1-201ENST00000477387 286 ntBASIC3.41□□□□□ -1.86
CDH3P22223 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH3P22223 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH3P22223 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH3P22223 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH3P22223 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH3P22223 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH3P22223 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH3P22223 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH3P22223 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH3P22223 AL353997.4-201ENST00000586196 166 ntBASIC3.41□□□□□ -1.86
CDH3P22223 AC110760.3-201ENST00000598794 467 ntBASIC3.41□□□□□ -1.86
CDH3P22223 MTCYBP22-201ENST00000603788 447 ntBASIC3.41□□□□□ -1.86
CDH3P22223 DUXAP11-201ENST00000603858 526 ntBASIC3.41□□□□□ -1.86
CDH3P22223 AC097468.3-201ENST00000607956 456 ntBASIC3.41□□□□□ -1.86
CDH3P22223 AC107214.2-201ENST00000608204 634 ntBASIC3.41□□□□□ -1.86
CDH3P22223 AC107294.3-201ENST00000609211 526 ntBASIC3.41□□□□□ -1.86
CDH3P22223 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.41□□□□□ -1.86
CDH3P22223 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.41□□□□□ -1.86
CDH3P22223 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH3P22223 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH3P22223 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CDH3P22223 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH3P22223 AC073073.2-201ENST00000609827 2578 ntBASIC3.41□□□□□ -1.86
CDH3P22223 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH3P22223 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH3P22223 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.4□□□□□ -1.86
CDH3P22223 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH3P22223 Y_RNA.234-201ENST00000364409 97 ntBASIC3.4□□□□□ -1.87
CDH3P22223 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH3P22223 Y_RNA.548-201ENST00000384656 105 ntBASIC3.4□□□□□ -1.87
CDH3P22223 MIR183-201ENST00000384958 110 ntBASIC3.4□□□□□ -1.87
CDH3P22223 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CDH3P22223 RNU1-101P-201ENST00000391171 127 ntBASIC3.4□□□□□ -1.87
CDH3P22223 MIR320C1-201ENST00000408566 88 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC109780.2-201ENST00000413467 845 ntBASIC3.4□□□□□ -1.87
CDH3P22223 RPS7P15-201ENST00000415804 584 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH3P22223 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH3P22223 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH3P22223 AC006946.1-201ENST00000429106 328 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH3P22223 PAXBP1P1-201ENST00000449315 447 ntBASIC3.4□□□□□ -1.87
CDH3P22223 ZNF114P1-201ENST00000453500 292 ntBASIC3.4□□□□□ -1.87
CDH3P22223 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH3P22223 RPS4XP2-201ENST00000458402 793 ntBASIC3.4□□□□□ -1.87
CDH3P22223 RPL7P5-201ENST00000471472 736 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC025518.1-201ENST00000479856 347 ntBASIC3.4□□□□□ -1.87
CDH3P22223 FCF1P3-201ENST00000496394 590 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC114967.1-201ENST00000504890 259 ntBASIC3.4□□□□□ -1.87
CDH3P22223 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH3P22223 AC006390.1-201ENST00000508068 283 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC034159.1-201ENST00000513885 583 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH3P22223 RNU6-579P-201ENST00000516879 102 ntBASIC3.4□□□□□ -1.87
CDH3P22223 RNU6-711P-201ENST00000517255 106 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC068657.1-201ENST00000520807 306 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH3P22223 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH3P22223 AL356057.1-201ENST00000533798 831 ntBASIC3.4□□□□□ -1.87
CDH3P22223 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH3P22223 SETP7-201ENST00000552169 453 ntBASIC3.4□□□□□ -1.87
CDH3P22223 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH3P22223 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH3P22223 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH3P22223 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH3P22223 AP001004.1-201ENST00000582468 324 ntBASIC3.4□□□□□ -1.87
CDH3P22223 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH3P22223 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH3P22223 AC008507.1-201ENST00000587506 734 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AP001029.3-201ENST00000588063 596 ntBASIC3.4□□□□□ -1.87
CDH3P22223 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH3P22223 AC012669.1-201ENST00000603209 283 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AL133393.1-201ENST00000603277 287 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC004853.1-201ENST00000604902 698 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC103710.4-201ENST00000609301 899 ntBASIC3.4□□□□□ -1.87
CDH3P22223 MIR7844-201ENST00000616161 122 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AL590240.3-201ENST00000621416 943 ntBASIC3.4□□□□□ -1.87
CDH3P22223 AC091965.5-201ENST00000624785 342 ntBASIC3.4□□□□□ -1.87
CDH3P22223 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH3P22223 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH3P22223 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH3P22223 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH3P22223 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH3P22223 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CDH3P22223 CR383658.2-201ENST00000547576 1525 ntBASIC3.39□□□□□ -1.87
CDH3P22223 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CDH3P22223 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDH3P22223 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH3P22223 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH3P22223 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH3P22223 AL049780.3-201ENST00000624612 1583 ntBASIC3.39□□□□□ -1.87
CDH3P22223 AC244517.1-201ENST00000606030 2086 ntBASIC3.39□□□□□ -1.87
CDH3P22223 AL672167.1-206ENST00000356293 943 ntBASIC3.39□□□□□ -1.87
CDH3P22223 FRG1CP-201ENST00000358464 769 ntBASIC3.39□□□□□ -1.87
CDH3P22223 RNA5SP72-201ENST00000364442 117 ntBASIC3.39□□□□□ -1.87
CDH3P22223 RNU6-744P-201ENST00000365557 107 ntBASIC3.39□□□□□ -1.87
CDH3P22223 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH3P22223 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH3P22223 RNU6-1316P-201ENST00000384242 108 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms