Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC113420.1-201ENST00000507903 571 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 XKRY-201ENST00000510392 1100 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 RNU6-276P-201ENST00000516114 96 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 RNU6-1308P-201ENST00000516817 103 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 Y_RNA.717-201ENST00000517106 92 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.21□□□□□ -2.06
COL5A1P20908 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.21□□□□□ -2.06
COL5A1P20908 AC006518.2-201ENST00000542513 940 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.21□□□□□ -2.06
COL5A1P20908 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.21□□□□□ -2.06
COL5A1P20908 AL049870.4-201ENST00000555741 486 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.21□□□□□ -2.06
COL5A1P20908 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.21□□□□□ -2.06
COL5A1P20908 AC010735.1-201ENST00000567305 1026 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AC135628.1-201ENST00000568867 534 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 PSMA6P4-201ENST00000603247 718 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AC073387.2-201ENST00000604797 784 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AC009974.1-201ENST00000608881 455 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AC079395.3-201ENST00000615161 484 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 AC022079.2-201ENST00000619739 566 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 C2orf27A-204ENST00000623058 969 ntBASIC2.21□□□□□ -2.06
COL5A1P20908 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL5A1P20908 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
COL5A1P20908 MTND5P7-201ENST00000413558 1798 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 RNA5SP27-201ENST00000363839 119 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
COL5A1P20908 SNORD21-201ENST00000383953 95 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 TAS2R15P-201ENST00000390674 928 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 U8.13-201ENST00000390842 128 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 SAR1AP2-201ENST00000392696 594 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AL591416.1-201ENST00000404015 867 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.2□□□□□ -2.06
COL5A1P20908 XKRYP4-201ENST00000414395 483 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.2□□□□□ -2.06
COL5A1P20908 Z82205.1-201ENST00000428456 297 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 MTCYBP15-201ENST00000433123 1127 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AC093716.1-201ENST00000435923 377 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 MTCO1P53-201ENST00000441633 699 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AC245517.4-201ENST00000448601 281 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 XKRYP5-201ENST00000449659 483 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.2□□□□□ -2.06
COL5A1P20908 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AC020699.1-201ENST00000505161 445 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.2□□□□□ -2.06
COL5A1P20908 AC010198.2-201ENST00000550612 259 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 MTCYBP23-201ENST00000558717 1102 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.2□□□□□ -2.06
COL5A1P20908 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.2□□□□□ -2.06
COL5A1P20908 AC095057.3-201ENST00000567102 1157 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AC006270.2-201ENST00000578523 652 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AC234772.3-201ENST00000602277 528 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AC093424.1-201ENST00000604999 338 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AL137847.3-201ENST00000611521 109 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.2□□□□□ -2.06
COL5A1P20908 AC024595.1-201ENST00000623088 387 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AL078595.3-201ENST00000623815 1166 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 AP000676.4-201ENST00000624659 623 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 MIR219B-201ENST00000637023 88 ntBASIC2.2□□□□□ -2.06
COL5A1P20908 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COL5A1P20908 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.2□□□□□ -2.06
COL5A1P20908 AL512646.1-201ENST00000269395 1077 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL5A1P20908 U8.8-201ENST00000365399 135 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 RNY3P9-201ENST00000384727 106 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 MT-TP-201ENST00000387461 68 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 MTCO3P4-201ENST00000419236 787 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 MTCO2P20-201ENST00000437339 673 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.19□□□□□ -2.06
COL5A1P20908 HSFY3P-201ENST00000444242 1191 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.19□□□□□ -2.06
COL5A1P20908 RPL34P26-201ENST00000445636 354 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL5A1P20908 PTGES3P5-201ENST00000455109 434 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 HMGB3P30-201ENST00000457863 606 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 SNORA19.3-201ENST00000516165 130 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AP003467.2-201ENST00000520175 319 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.19□□□□□ -2.06
COL5A1P20908 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.19□□□□□ -2.06
COL5A1P20908 AC105137.2-201ENST00000569073 466 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 ISCA1P3-201ENST00000577104 373 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.19□□□□□ -2.06
COL5A1P20908 VN1R7P-201ENST00000619242 903 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 OR1S1-201ENST00000624470 978 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 MFSD8-245ENST00000641743 948 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 WWP1P1-201ENST00000466609 2769 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.19□□□□□ -2.06
COL5A1P20908 MTND5P28-201ENST00000438005 1594 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC025125.1-201ENST00000624743 1922 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL5A1P20908 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL5A1P20908 RNU6-298P-201ENST00000390888 96 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 ANAPC10P1-201ENST00000395991 556 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.19□□□□□ -2.06
COL5A1P20908 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.19□□□□□ -2.06
COL5A1P20908 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.19□□□□□ -2.06
COL5A1P20908 AC108667.1-201ENST00000428618 249 ntBASIC2.19□□□□□ -2.06
COL5A1P20908 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.19□□□□□ -2.06
COL5A1P20908 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms