Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SNORD39.4-201ENST00000620099 78 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 AL158801.5-201ENST00000623123 465 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 AP002791.1-201ENST00000623291 381 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 AC017037.3-201ENST00000625016 472 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ERCC2P18074 U6.105-201ENST00000637379 88 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 OR8B1P-202ENST00000641132 1178 ntBASIC3.42□□□□□ -1.86
ERCC2P18074 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
ERCC2P18074 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ERCC2P18074 AC118273.1-201ENST00000525324 3006 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.41□□□□□ -1.86
ERCC2P18074 MTND4P16-201ENST00000466108 1367 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ERCC2P18074 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ERCC2P18074 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
ERCC2P18074 SNORA71.3-201ENST00000362582 128 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.41□□□□□ -1.86
ERCC2P18074 MIR670-201ENST00000390142 98 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ERCC2P18074 AL590084.2-201ENST00000401481 382 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 MIR1305-201ENST00000408300 86 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AC093578.1-201ENST00000415219 368 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AC097713.2-201ENST00000430199 356 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.41□□□□□ -1.86
ERCC2P18074 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.41□□□□□ -1.86
ERCC2P18074 SNRPEP4-201ENST00000435815 279 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 UBE2FP3-201ENST00000436366 524 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AC005019.1-201ENST00000436455 431 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 ATP5C1P1-201ENST00000441945 895 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ERCC2P18074 HSPE1P6-201ENST00000479457 291 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 MTCYBP35-201ENST00000503630 1137 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.41□□□□□ -1.86
ERCC2P18074 AC021678.1-201ENST00000505195 936 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.41□□□□□ -1.86
ERCC2P18074 RPL12P22-201ENST00000519073 490 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 DUXAP2-201ENST00000519198 589 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.41□□□□□ -1.86
ERCC2P18074 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.41□□□□□ -1.86
ERCC2P18074 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.41□□□□□ -1.86
ERCC2P18074 ZNF321P-202ENST00000550843 495 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.41□□□□□ -1.86
ERCC2P18074 AP000811.1-201ENST00000603803 651 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AL162713.1-201ENST00000604480 262 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AC103710.4-201ENST00000609301 899 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 uc_338.1-201ENST00000612113 180 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AC002076.2-201ENST00000617362 122 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AL603758.1-201ENST00000618654 241 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 AC007496.3-201ENST00000624987 3443 ntBASIC3.41□□□□□ -1.86
ERCC2P18074 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ERCC2P18074 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
ERCC2P18074 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.4□□□□□ -1.87
ERCC2P18074 MIR23B-201ENST00000384832 97 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC119751.3-201ENST00000399720 670 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ERCC2P18074 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC2P18074 TPMTP3-201ENST00000411928 735 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 HMGN1P24-201ENST00000412282 298 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 HMGB1P11-201ENST00000413899 637 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC2P18074 AC233728.2-201ENST00000425348 757 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.4□□□□□ -1.87
ERCC2P18074 HMGN2P20-201ENST00000437531 273 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 HMGB3P11-201ENST00000440127 604 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.4□□□□□ -1.87
ERCC2P18074 FAM103A2P-201ENST00000444122 354 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.4□□□□□ -1.87
ERCC2P18074 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.4□□□□□ -1.87
ERCC2P18074 AL049714.1-201ENST00000466686 347 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.4□□□□□ -1.87
ERCC2P18074 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 RNU6-798P-201ENST00000516912 103 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.4□□□□□ -1.87
ERCC2P18074 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.4□□□□□ -1.87
ERCC2P18074 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AP004247.1-201ENST00000531556 1289 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC068587.4-201ENST00000533893 186 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC011611.1-201ENST00000552179 197 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ERCC2P18074 NCAPGP2-201ENST00000557911 754 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC060771.1-201ENST00000582031 164 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.4□□□□□ -1.87
ERCC2P18074 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC2P18074 AC008739.3-201ENST00000603262 127 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AL357094.1-201ENST00000603845 844 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC009902.3-201ENST00000606235 2172 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC140725.3-201ENST00000616193 880 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AL355493.4-201ENST00000618530 292 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC009268.2-201ENST00000621925 457 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC2P18074 AC079597.1-201ENST00000624306 508 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC2P18074 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC2P18074 AC099063.3-201ENST00000642066 185 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ERCC2P18074 CUL1P1-201ENST00000509510 2425 ntBASIC3.4□□□□□ -1.87
ERCC2P18074 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ERCC2P18074 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms