| MUC1 | P15941 | AL590084.1-201 | ENST00000407885 | 387 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC068533.2-201 | ENST00000411872 | 306 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | RPL7P8-201 | ENST00000411964 | 730 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC013286.1-201 | ENST00000412137 | 381 nt | TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | EEF1A1P41-201 | ENST00000414667 | 207 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC019064.1-201 | ENST00000414796 | 499 nt | TSL 2 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC007463.1-201 | ENST00000416534 | 734 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | FNDC3CP-201 | ENST00000420795 | 1155 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AF212831.1-201 | ENST00000430064 | 377 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC008067.1-203 | ENST00000430876 | 359 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | PTENP1-201 | ENST00000447117 | 1215 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC007327.1-201 | ENST00000447461 | 264 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | GAS5-221 | ENST00000450589 | 632 nt | TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | SLC16A12-AS1-202 | ENST00000454270 | 478 nt | TSL 2 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AL157400.4-201 | ENST00000455699 | 667 nt | TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | USP9YP25-201 | ENST00000457708 | 443 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC103975.1-201 | ENST00000482506 | 483 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | RPL23AP55-201 | ENST00000498163 | 452 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | OR5H5P-201 | ENST00000503164 | 928 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC093689.1-203 | ENST00000505967 | 299 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC016687.2-203 | ENST00000506650 | 578 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | SNORA74D-201 | ENST00000516404 | 141 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | RNU4ATAC10P-201 | ENST00000516967 | 122 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | SPINK7-205 | ENST00000523535 | 299 nt | TSL 2 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | ZFPM2-AS1-207 | ENST00000524045 | 987 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | MYL12A-202 | ENST00000536605 | 899 nt | APPRIS P1 TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC005832.3-201 | ENST00000537929 | 631 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | MYL12A-209 | ENST00000580887 | 899 nt | TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC015908.2-202 | ENST00000585243 | 756 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC090771.2-201 | ENST00000588794 | 571 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | RNASEH2B-AS1-202 | ENST00000593369 | 648 nt | TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC135012.2-201 | ENST00000600234 | 479 nt | TSL 2 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AL390838.2-201 | ENST00000602394 | 274 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | THRA1/BTR-203 | ENST00000604191 | 571 nt | TSL 4 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC090115.4-201 | ENST00000609970 | 188 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | RASSF8-215 | ENST00000611440 | 852 nt | TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC068831.7-201 | ENST00000616954 | 363 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | SNHG22-203 | ENST00000617833 | 660 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC023510.2-201 | ENST00000622162 | 746 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC120349.2-201 | ENST00000625002 | 298 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | ZNF382-210 | ENST00000639288 | 834 nt | TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | TRAPPC13-208 | ENST00000505553 | 1410 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| MUC1 | P15941 | MAPK10-322 | ENST00000641485 | 4530 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | OR4K2-204 | ENST00000641885 | 8681 nt | APPRIS P1 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | TRIQK-201 | ENST00000378861 | 1596 nt | APPRIS P1 TSL 1 (best) BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | ZNF37BP-203 | ENST00000452306 | 1352 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | HERC4-201 | ENST00000277817 | 4371 nt | TSL 1 (best) BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | SNRPEP3-201 | ENST00000338402 | 276 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | Y_RNA.25-201 | ENST00000362528 | 102 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | RNU1-35P-201 | ENST00000362782 | 153 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | RNU4-92P-201 | ENST00000363783 | 136 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | Y_RNA.192-201 | ENST00000363977 | 102 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | RNU6-560P-201 | ENST00000364007 | 108 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | RNU6-1027P-201 | ENST00000383998 | 107 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | MIR181A2-201 | ENST00000384863 | 110 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | MIR512-1-201 | ENST00000384913 | 84 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | MT-TC-201 | ENST00000387405 | 66 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | MTND4LP20-201 | ENST00000402379 | 270 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | B3GALNT1P1-201 | ENST00000420569 | 975 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC013402.2-201 | ENST00000424257 | 437 nt | TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | ZRANB2-AS2-204 | ENST00000430605 | 213 nt | TSL 2 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | PPEF1-AS1-201 | ENST00000430641 | 430 nt | TSL 5 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC072062.1-204 | ENST00000437897 | 1132 nt | TSL 5 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AL356475.1-201 | ENST00000440321 | 341 nt | TSL 5 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | LINC00393-201 | ENST00000443621 | 282 nt | TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AL161937.1-201 | ENST00000444478 | 425 nt | TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | VN1R10P-201 | ENST00000447106 | 875 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | NIPA2P5-201 | ENST00000452282 | 464 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AL583803.1-201 | ENST00000454262 | 334 nt | TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | NECAP1P2-201 | ENST00000455668 | 727 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC092757.1-201 | ENST00000467293 | 467 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC091212.1-201 | ENST00000474798 | 395 nt | TSL 5 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC020699.1-201 | ENST00000505161 | 445 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | ZFAND1-217 | ENST00000521895 | 885 nt | TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC125611.1-201 | ENST00000549563 | 229 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | DNAJC8P1-201 | ENST00000554535 | 372 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC107954.1-201 | ENST00000565906 | 727 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | RPL26-207 | ENST00000583011 | 524 nt | APPRIS P1 TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AL356575.1-201 | ENST00000603008 | 283 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC135507.2-201 | ENST00000612443 | 309 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | ATP5A1P2-202 | ENST00000616464 | 443 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC092650.2-201 | ENST00000619984 | 902 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC009318.4-201 | ENST00000620496 | 486 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC091953.5-201 | ENST00000622919 | 233 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC009039.2-201 | ENST00000624524 | 529 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | AC009951.2-201 | ENST00000634873 | 644 nt | TSL 5 BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | HPGDS-201 | ENST00000295256 | 1636 nt | APPRIS P1 TSL 1 (best) BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | CHD9-202 | ENST00000398510 | 11337 nt | TSL 1 (best) BASIC | 2.41 | □□□□□ -2.02 | | |
| MUC1 | P15941 | TPTE2-203 | ENST00000390680 | 1558 nt | TSL 1 (best) BASIC | 2.4 | □□□□□ -2.02 | | |
| MUC1 | P15941 | MCF2-208 | ENST00000519895 | 3346 nt | APPRIS ALT2 TSL 2 BASIC | 2.4 | □□□□□ -2.02 | | |
| MUC1 | P15941 | NOC3L-201 | ENST00000371361 | 3455 nt | APPRIS P1 TSL 1 (best) BASIC | 2.4 | □□□□□ -2.02 | | |
| MUC1 | P15941 | PRKACB-218 | ENST00000610703 | 4240 nt | TSL 2 BASIC | 2.4 | □□□□□ -2.02 | | |
| MUC1 | P15941 | C1D-201 | ENST00000355848 | 2233 nt | APPRIS P1 TSL 1 (best) BASIC | 2.4 | □□□□□ -2.03 | | |
| MUC1 | P15941 | RNU6-216P-201 | ENST00000363282 | 104 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| MUC1 | P15941 | RNVU1-3-201 | ENST00000364313 | 161 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| MUC1 | P15941 | SNORD82-201 | ENST00000365530 | 70 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| MUC1 | P15941 | MLLT3-201 | ENST00000380321 | 708 nt | TSL 3 BASIC | 2.4 | □□□□□ -2.03 | | |
| MUC1 | P15941 | SNORA44-201 | ENST00000384584 | 132 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| MUC1 | P15941 | MIR513B-201 | ENST00000385136 | 84 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| MUC1 | P15941 | SNRPEP2-201 | ENST00000397592 | 279 nt | BASIC | 2.4 | □□□□□ -2.03 | | |