Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC087359.1-201ENST00000508335 1740 ntBASIC3.15□□□□□ -1.91
TOP1P11387 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TOP1P11387 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TOP1P11387 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TOP1P11387 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TOP1P11387 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TOP1P11387 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.14□□□□□ -1.91
TOP1P11387 SNORD116-23-201ENST00000384645 92 ntBASIC3.14□□□□□ -1.91
TOP1P11387 MIR34A-201ENST00000385130 110 ntBASIC3.14□□□□□ -1.91
TOP1P11387 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.14□□□□□ -1.91
TOP1P11387 RPL7P10-201ENST00000417407 739 ntBASIC3.14□□□□□ -1.91
TOP1P11387 DEFB130D-201ENST00000426866 237 ntBASIC3.14□□□□□ -1.91
TOP1P11387 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP1P11387 AC236972.1-201ENST00000433225 199 ntBASIC3.14□□□□□ -1.91
TOP1P11387 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP1P11387 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP1P11387 AC241584.1-201ENST00000438469 1241 ntBASIC3.14□□□□□ -1.91
TOP1P11387 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP1P11387 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.14□□□□□ -1.91
TOP1P11387 AC104982.1-201ENST00000478775 574 ntBASIC3.14□□□□□ -1.91
TOP1P11387 AC084024.2-201ENST00000503480 791 ntBASIC3.14□□□□□ -1.91
TOP1P11387 ELOCP31-201ENST00000540463 467 ntBASIC3.14□□□□□ -1.91
TOP1P11387 YWHAZP1-201ENST00000556286 722 ntBASIC3.14□□□□□ -1.91
TOP1P11387 AC093519.1-201ENST00000566109 298 ntBASIC3.14□□□□□ -1.91
TOP1P11387 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP1P11387 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP1P11387 AC091057.3-201ENST00000602684 733 ntBASIC3.14□□□□□ -1.91
TOP1P11387 AC097504.2-201ENST00000608088 454 ntBASIC3.14□□□□□ -1.91
TOP1P11387 AC124016.2-201ENST00000610058 665 ntBASIC3.14□□□□□ -1.91
TOP1P11387 AC131902.3-201ENST00000611767 581 ntBASIC3.14□□□□□ -1.91
TOP1P11387 AL512506.2-201ENST00000624472 458 ntBASIC3.14□□□□□ -1.91
TOP1P11387 AC010608.3-201ENST00000625048 527 ntBASIC3.14□□□□□ -1.91
TOP1P11387 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.14□□□□□ -1.91
TOP1P11387 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TOP1P11387 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
TOP1P11387 AC138915.1-201ENST00000565427 1685 ntBASIC3.14□□□□□ -1.91
TOP1P11387 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
TOP1P11387 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TOP1P11387 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.13□□□□□ -1.91
TOP1P11387 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TOP1P11387 RNU6-925P-201ENST00000384629 104 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AL355615.1-201ENST00000406187 641 ntBASIC3.13□□□□□ -1.91
TOP1P11387 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.13□□□□□ -1.91
TOP1P11387 FCF1P2-201ENST00000415284 583 ntBASIC3.13□□□□□ -1.91
TOP1P11387 RPL7P30-201ENST00000420888 709 ntBASIC3.13□□□□□ -1.91
TOP1P11387 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.13□□□□□ -1.91
TOP1P11387 ARL5AP4-201ENST00000430731 512 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.13□□□□□ -1.91
TOP1P11387 Z96811.1-201ENST00000445880 108 ntBASIC3.13□□□□□ -1.91
TOP1P11387 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.13□□□□□ -1.91
TOP1P11387 UBE2DNL-203ENST00000474922 222 ntBASIC3.13□□□□□ -1.91
TOP1P11387 RN7SL432P-201ENST00000484057 298 ntBASIC3.13□□□□□ -1.91
TOP1P11387 RNU6-415P-201ENST00000516252 97 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AC104986.1-201ENST00000517978 436 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AP000889.1-201ENST00000530968 660 ntBASIC3.13□□□□□ -1.91
TOP1P11387 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.13□□□□□ -1.91
TOP1P11387 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.13□□□□□ -1.91
TOP1P11387 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.13□□□□□ -1.91
TOP1P11387 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.13□□□□□ -1.91
TOP1P11387 AC020895.1-201ENST00000595362 272 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AL022099.1-201ENST00000604551 712 ntBASIC3.13□□□□□ -1.91
TOP1P11387 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AL512427.1-201ENST00000618593 349 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AC090772.4-201ENST00000623599 362 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AP003485.1-201ENST00000625093 753 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AL590396.4-201ENST00000636779 956 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AL445984.1-201ENST00000637834 659 ntBASIC3.13□□□□□ -1.91
TOP1P11387 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.13□□□□□ -1.91
TOP1P11387 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TOP1P11387 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TOP1P11387 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TOP1P11387 ZNF849P-201ENST00000594711 1566 ntBASIC3.12□□□□□ -1.91
TOP1P11387 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TOP1P11387 ANKRD36P1-201ENST00000344424 659 ntBASIC3.12□□□□□ -1.91
TOP1P11387 RNU5B-4P-201ENST00000363508 111 ntBASIC3.12□□□□□ -1.91
TOP1P11387 RNU6-1155P-201ENST00000363554 107 ntBASIC3.12□□□□□ -1.91
TOP1P11387 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TOP1P11387 AP002784.2-201ENST00000397300 549 ntBASIC3.12□□□□□ -1.91
TOP1P11387 UBE2V1P2-201ENST00000397758 440 ntBASIC3.12□□□□□ -1.91
TOP1P11387 AL512633.1-201ENST00000399931 655 ntBASIC3.12□□□□□ -1.91
TOP1P11387 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.12□□□□□ -1.91
TOP1P11387 AC109583.1-201ENST00000432156 268 ntBASIC3.12□□□□□ -1.91
TOP1P11387 AL590639.1-201ENST00000456484 337 ntBASIC3.12□□□□□ -1.91
TOP1P11387 AC009901.1-201ENST00000506703 541 ntBASIC3.12□□□□□ -1.91
TOP1P11387 AC096725.1-201ENST00000514266 313 ntBASIC3.12□□□□□ -1.91
TOP1P11387 SCARNA1-201ENST00000517138 166 ntBASIC3.12□□□□□ -1.91
TOP1P11387 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.12□□□□□ -1.91
TOP1P11387 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.12□□□□□ -1.91
TOP1P11387 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.12□□□□□ -1.91
TOP1P11387 AL133271.1-201ENST00000538229 291 ntBASIC3.12□□□□□ -1.91
TOP1P11387 MTCO1P40-201ENST00000574371 625 ntBASIC3.12□□□□□ -1.91
TOP1P11387 MIR3609-201ENST00000582661 80 ntBASIC3.12□□□□□ -1.91
TOP1P11387 BNIP3P40-201ENST00000596017 556 ntBASIC3.12□□□□□ -1.91
TOP1P11387 AC091057.2-201ENST00000602594 792 ntBASIC3.12□□□□□ -1.91
TOP1P11387 AC019159.1-201ENST00000605094 187 ntBASIC3.12□□□□□ -1.91
TOP1P11387 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.12□□□□□ -1.91
TOP1P11387 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.12□□□□□ -1.91
TOP1P11387 AC016597.2-201ENST00000613256 341 ntBASIC3.12□□□□□ -1.91
TOP1P11387 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.12□□□□□ -1.91
TOP1P11387 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms