Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL513477.1-202ENST00000417061 214 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AC129850.1-201ENST00000436203 508 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 RPL7P36-201ENST00000444633 681 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 PABPC1P3-201ENST00000469174 459 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 SETP11-201ENST00000473027 690 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 MLLT10P2-201ENST00000506434 249 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 IGJP1-201ENST00000522682 475 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AP005205.1-201ENST00000563503 508 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AC233266.2-201ENST00000567067 528 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 FAM60BP-201ENST00000578364 658 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 MIR4446-201ENST00000578505 67 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 SNORD53-201ENST00000579969 78 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 LRRC37A5P-203ENST00000580181 585 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AC107294.1-201ENST00000609524 467 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AC096586.1-201ENST00000610267 561 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AC093591.3-201ENST00000634516 308 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 MFSD8-245ENST00000641743 948 ntBASIC2.21□□□□□ -2.06
HLA-DQB2P05538 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DQB2P05538 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQB2P05538 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 RNU6-796P-201ENST00000391086 107 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AL009174.1-201ENST00000426577 416 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AC073901.1-201ENST00000462471 408 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 CBX3P3-201ENST00000508108 532 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AC118465.1-201ENST00000513820 1271 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 RNU6-416P-201ENST00000516265 103 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 SNORA31.11-201ENST00000516528 139 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 SCARNA16.3-201ENST00000516595 184 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AP000790.1-201ENST00000528891 737 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DQB2P05538 SNRPGP18-201ENST00000553000 214 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 MED28P6-201ENST00000558776 231 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AC009063.1-201ENST00000563342 702 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AC009163.5-201ENST00000575421 637 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 MIR5194-201ENST00000582634 120 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DQB2P05538 HSPE1P7-201ENST00000604681 321 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AL161734.1-201ENST00000609720 557 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AC106028.5-201ENST00000610332 395 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AL163051.2-201ENST00000618976 735 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 MIR6132-201ENST00000622083 109 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQB2P05538 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
HLA-DQB2P05538 AC005336.3-201ENST00000623833 2679 ntBASIC2.2□□□□□ -2.06
HLA-DQB2P05538 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQB2P05538 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AL513185.3-201ENST00000433335 1300 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 RNU5D-1-201ENST00000363299 116 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 MIR493-201ENST00000385254 89 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 U3.29-201ENST00000391296 212 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AL137014.1-201ENST00000420490 1226 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AC114878.1-201ENST00000441166 358 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 GZMAP1-201ENST00000503054 631 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AC008549.1-201ENST00000512900 643 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 RPPH1-2P-201ENST00000516688 293 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AP001317.1-201ENST00000531194 960 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AL020997.3-201ENST00000602843 359 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AL049779.4-201ENST00000604500 156 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 MIR1264-201ENST00000616374 69 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AL590808.1-201ENST00000618696 141 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 FO624990.1-201ENST00000636373 85 ntBASIC2.19□□□□□ -2.06
HLA-DQB2P05538 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DQB2P05538 AC026241.1-201ENST00000517873 2142 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DQB2P05538 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DQB2P05538 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DQB2P05538 SNORA80E-201ENST00000384744 137 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 SNORA3.2-201ENST00000408221 125 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC092447.6-201ENST00000414578 210 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 Z98742.3-201ENST00000418637 326 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC005005.2-201ENST00000420779 380 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC007000.2-201ENST00000442564 487 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AL929288.2-201ENST00000446368 407 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 OR6K5P-201ENST00000447050 945 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AL118520.1-201ENST00000450770 291 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms