Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.61□□□□□ -1.83
GGPS1O95749 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.61□□□□□ -1.83
GGPS1O95749 AC234772.3-201ENST00000602277 528 ntBASIC3.61□□□□□ -1.83
GGPS1O95749 AC013444.2-201ENST00000603317 787 ntBASIC3.61□□□□□ -1.83
GGPS1O95749 TUSC7.1-201ENST00000610969 165 ntBASIC3.61□□□□□ -1.83
GGPS1O95749 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.61□□□□□ -1.83
GGPS1O95749 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GGPS1O95749 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
GGPS1O95749 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
GGPS1O95749 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
GGPS1O95749 AC118273.1-201ENST00000525324 3006 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
GGPS1O95749 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
GGPS1O95749 RNA5SP383-201ENST00000362934 120 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 RNU6-289P-201ENST00000364093 107 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 RNU6-777P-201ENST00000364265 104 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 MIR634-201ENST00000385208 97 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
GGPS1O95749 UBA52P6-201ENST00000399822 382 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 RPS3AP24-201ENST00000407896 734 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 RNA5SP293-201ENST00000410527 113 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.6□□□□□ -1.83
GGPS1O95749 MTATP6P4-201ENST00000427725 675 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.6□□□□□ -1.83
GGPS1O95749 AC024082.2-201ENST00000434771 238 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.6□□□□□ -1.83
GGPS1O95749 RPL30P9-201ENST00000465586 330 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 AC108860.1-201ENST00000484521 383 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 HMGB1P36-201ENST00000487709 576 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
GGPS1O95749 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.6□□□□□ -1.83
GGPS1O95749 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.6□□□□□ -1.83
GGPS1O95749 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.6□□□□□ -1.83
GGPS1O95749 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.6□□□□□ -1.83
GGPS1O95749 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.6□□□□□ -1.83
GGPS1O95749 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.6□□□□□ -1.83
GGPS1O95749 AL354943.1-201ENST00000572103 781 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 COX6CP3-201ENST00000580869 223 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.6□□□□□ -1.83
GGPS1O95749 AC106900.2-201ENST00000604994 317 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 AC100793.4-201ENST00000613683 429 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 MIR6130-201ENST00000619419 109 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 AC011330.2-201ENST00000621680 635 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 AC073476.4-201ENST00000628409 72 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
GGPS1O95749 ZNF807-201ENST00000328088 1707 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 AC087359.1-201ENST00000508335 1740 ntBASIC3.6□□□□□ -1.83
GGPS1O95749 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GGPS1O95749 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GGPS1O95749 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
GGPS1O95749 AC092447.10-201ENST00000620607 1652 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
GGPS1O95749 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
GGPS1O95749 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
GGPS1O95749 RNU6-97P-201ENST00000363387 104 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 RNU6-744P-201ENST00000365557 107 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.59□□□□□ -1.83
GGPS1O95749 RNU6-1316P-201ENST00000384242 108 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 RNU6-1207P-201ENST00000384343 107 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GGPS1O95749 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GGPS1O95749 RSL24D1P4-201ENST00000400938 484 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 U3.42-201ENST00000408746 214 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 NEK4P1-201ENST00000433383 879 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.59□□□□□ -1.83
GGPS1O95749 RPL23AP22-201ENST00000437556 453 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.59□□□□□ -1.83
GGPS1O95749 ISCA1P2-201ENST00000438679 421 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 TXNP1-201ENST00000441872 371 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.59□□□□□ -1.83
GGPS1O95749 MTCO1P27-201ENST00000448269 226 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 PAXBP1P1-201ENST00000449315 447 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 AC234775.1-201ENST00000454247 670 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.59□□□□□ -1.83
GGPS1O95749 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.59□□□□□ -1.83
GGPS1O95749 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GGPS1O95749 AC147055.4-201ENST00000504399 745 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.59□□□□□ -1.83
GGPS1O95749 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.59□□□□□ -1.83
GGPS1O95749 MRPS36P3-201ENST00000519284 130 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 AC104027.1-201ENST00000521887 300 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 UBTFL10-201ENST00000528532 562 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
GGPS1O95749 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.59□□□□□ -1.83
GGPS1O95749 AP005205.1-201ENST00000563503 508 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 UBL5P2-201ENST00000583788 219 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 AL451007.1-201ENST00000595491 289 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 AC006539.2-201ENST00000601729 572 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 AL109653.1-201ENST00000603091 248 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 RNU6-88P-201ENST00000606801 100 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 AL139418.1-201ENST00000613613 177 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.59□□□□□ -1.83
GGPS1O95749 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
GGPS1O95749 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.59□□□□□ -1.83
GGPS1O95749 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.59□□□□□ -1.83
GGPS1O95749 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GGPS1O95749 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
GGPS1O95749 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
GGPS1O95749 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GGPS1O95749 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms