Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.55□□□□□ -2.16
ABCA1O95477 DNAJC19P9-201ENST00000555084 351 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.55□□□□□ -2.16
ABCA1O95477 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA1O95477 MTCO3P24-201ENST00000572729 782 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 SNORD84-203ENST00000584275 78 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 AC022336.2-201ENST00000568966 2538 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ABCA1O95477 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ABCA1O95477 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.55□□□□□ -2.16
ABCA1O95477 MTATP6P4-201ENST00000427725 675 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA1O95477 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA1O95477 AC104308.1-201ENST00000454621 333 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA1O95477 RPS29P12-201ENST00000460178 152 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 AC073901.1-201ENST00000462471 408 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
ABCA1O95477 AC140059.1-201ENST00000489238 361 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.55□□□□□ -2.16
ABCA1O95477 SEM1P1-201ENST00000506694 209 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 SNORD59.2-201ENST00000516873 68 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 RNU6-56P-201ENST00000516986 93 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 RNA5SP490-201ENST00000517141 136 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ABCA1O95477 SYF2P1-201ENST00000550658 413 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 VN1R80P-201ENST00000597126 338 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 VIS1.1-201ENST00000610517 203 ntBASIC1.55□□□□□ -2.16
ABCA1O95477 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
ABCA1O95477 AC012321.1-201ENST00000561622 1588 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
ABCA1O95477 RNU4-74P-201ENST00000411280 161 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA1O95477 MTCYBP24-201ENST00000420387 1106 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA1O95477 OR51AB1P-201ENST00000429046 620 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA1O95477 NDUFB4P6-201ENST00000436819 366 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA1O95477 RSL24D1P2-201ENST00000445584 366 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 AC087190.1-201ENST00000484462 480 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.54□□□□□ -2.16
ABCA1O95477 AC104564.1-201ENST00000493028 407 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
ABCA1O95477 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA1O95477 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA1O95477 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA1O95477 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.54□□□□□ -2.16
ABCA1O95477 AC020923.1-201ENST00000624021 917 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.54□□□□□ -2.16
ABCA1O95477 AC138915.1-201ENST00000565427 1685 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA1O95477 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA1O95477 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.54□□□□□ -2.16
ABCA1O95477 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA1O95477 AL139276.1-201ENST00000311910 1001 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA1O95477 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
ABCA1O95477 AC004022.2-201ENST00000413824 193 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 SSXP9-201ENST00000417503 292 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 RPL21P32-201ENST00000419877 477 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 snoU13.7-201ENST00000459220 104 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 AC089999.1-201ENST00000460336 374 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 AC025033.1-201ENST00000463883 194 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA1O95477 AC104115.2-201ENST00000523026 687 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA1O95477 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA1O95477 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
ABCA1O95477 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.54□□□□□ -2.16
ABCA1O95477 AL353748.2-201ENST00000622148 471 ntBASIC1.54□□□□□ -2.16
ABCA1O95477 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
ABCA1O95477 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ABCA1O95477 AC090740.1-201ENST00000623193 2262 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 AC092447.6-201ENST00000414578 210 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.53□□□□□ -2.16
ABCA1O95477 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.53□□□□□ -2.16
ABCA1O95477 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.53□□□□□ -2.16
ABCA1O95477 XKRYP6-201ENST00000440468 1116 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 MTND4LP16-201ENST00000440828 295 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 XKRYP3-201ENST00000442113 1116 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 RNU6-717P-201ENST00000459076 104 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 RPS23P3-201ENST00000470993 430 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.53□□□□□ -2.16
ABCA1O95477 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.53□□□□□ -2.16
ABCA1O95477 AC087373.1-201ENST00000524920 491 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.53□□□□□ -2.16
ABCA1O95477 AC002984.1-201ENST00000591692 448 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 APOOP1-201ENST00000604695 592 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 AC013562.2-201ENST00000611632 603 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ABCA1O95477 AC090617.7-201ENST00000623952 126 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 AC091953.2-201ENST00000623979 160 ntBASIC1.53□□□□□ -2.16
ABCA1O95477 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.53□□□□□ -2.16
ABCA1O95477 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.53□□□□□ -2.16
ABCA1O95477 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.53□□□□□ -2.17
ABCA1O95477 SNORA14A-201ENST00000364773 135 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 ELOCP11-201ENST00000436690 332 ntBASIC1.52□□□□□ -2.17
ABCA1O95477 ELOCP16-201ENST00000444494 332 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms