Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VAMP4O75379 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.18□□□□□ -1.58
VAMP4O75379 MIR3160-1-201ENST00000577972 85 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 MIR4458-201ENST00000578872 75 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.18□□□□□ -1.58
VAMP4O75379 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.18□□□□□ -1.58
VAMP4O75379 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.18□□□□□ -1.58
VAMP4O75379 KC877982.1-201ENST00000602313 470 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 Z84480.1-201ENST00000605131 311 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 OR6R2P-201ENST00000609216 300 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 AC079597.1-201ENST00000624306 508 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP4O75379 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VAMP4O75379 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP4O75379 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.18□□□□□ -1.58
VAMP4O75379 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP4O75379 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.18□□□□□ -1.58
VAMP4O75379 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP4O75379 RPL7P26-201ENST00000333817 754 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VAMP4O75379 RNU4-79P-201ENST00000362764 141 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 RNU6-97P-201ENST00000363387 104 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 SNORD35B-201ENST00000363660 87 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 SNORA51.2-201ENST00000364595 132 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 RNU6-74P-201ENST00000384235 107 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 FAT1P1-201ENST00000406588 507 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.17□□□□□ -1.58
VAMP4O75379 AC092832.1-201ENST00000422934 400 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AC105402.2-201ENST00000438503 358 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 DDX3P2-201ENST00000446138 111 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.17□□□□□ -1.58
VAMP4O75379 AC021382.1-201ENST00000483523 359 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AL132838.2-201ENST00000492041 314 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP4O75379 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP4O75379 TMEM248P1-201ENST00000510579 951 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 RNU6-410P-201ENST00000517006 107 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP4O75379 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.17□□□□□ -1.58
VAMP4O75379 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP4O75379 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP4O75379 AC037471.2-201ENST00000564941 598 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.17□□□□□ -1.58
VAMP4O75379 AC098848.2-201ENST00000588023 330 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.17□□□□□ -1.58
VAMP4O75379 AC104662.1-201ENST00000604448 511 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.17□□□□□ -1.58
VAMP4O75379 AC012603.1-201ENST00000606424 528 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AL132765.2-201ENST00000610812 351 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.17□□□□□ -1.58
VAMP4O75379 AC233309.1-201ENST00000619522 751 ntBASIC5.17□□□□□ -1.58
VAMP4O75379 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.17□□□□□ -1.58
VAMP4O75379 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.17□□□□□ -1.58
VAMP4O75379 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VAMP4O75379 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VAMP4O75379 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VAMP4O75379 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VAMP4O75379 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VAMP4O75379 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.16□□□□□ -1.58
VAMP4O75379 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
VAMP4O75379 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VAMP4O75379 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.16□□□□□ -1.58
VAMP4O75379 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VAMP4O75379 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.16□□□□□ -1.58
VAMP4O75379 RNA5SP399-201ENST00000364003 117 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 RNU6-606P-201ENST00000384721 111 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 PPIAP31-201ENST00000405422 495 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 RN7SKP32-201ENST00000410167 303 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 RNU2-9P-201ENST00000410194 145 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 RNU4-6P-201ENST00000410804 122 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 AC004987.3-201ENST00000413879 771 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.16□□□□□ -1.58
VAMP4O75379 RPS15AP12-201ENST00000419498 388 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 MTCO3P46-201ENST00000425787 232 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.16□□□□□ -1.58
VAMP4O75379 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.16□□□□□ -1.58
VAMP4O75379 TAAR7P-201ENST00000436141 242 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.16□□□□□ -1.58
VAMP4O75379 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.16□□□□□ -1.58
VAMP4O75379 NIPA2P2-201ENST00000496376 1083 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VAMP4O75379 HMGN1P13-201ENST00000505795 138 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 SCARNA15.1-201ENST00000516384 125 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 RNU6-1153P-201ENST00000516760 105 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 AC134698.5-201ENST00000519444 336 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.16□□□□□ -1.58
VAMP4O75379 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.16□□□□□ -1.58
VAMP4O75379 AC092470.1-201ENST00000546187 132 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.16□□□□□ -1.58
VAMP4O75379 AC060771.1-201ENST00000582031 164 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 uc_338.12-201ENST00000616344 181 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 AC090574.1-201ENST00000623186 233 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 AL773545.4-201ENST00000637262 310 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 AL513478.4-201ENST00000641636 310 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 MAPK10-253ENST00000641010 4072 ntBASIC5.16□□□□□ -1.58
VAMP4O75379 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.16□□□□□ -1.58
VAMP4O75379 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms