Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 U8.8-201ENST00000365399 135 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 RNU6-796P-201ENST00000391086 107 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 AC092745.2-202ENST00000411880 369 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 TOMM22P1-201ENST00000418578 312 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.9□□□□□ -1.95
NPHP4O75161 ZFAND6P1-201ENST00000434138 605 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.9□□□□□ -1.95
NPHP4O75161 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.9□□□□□ -1.95
NPHP4O75161 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.9□□□□□ -1.95
NPHP4O75161 Z99714.1-201ENST00000450463 807 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.9□□□□□ -1.95
NPHP4O75161 AC008571.1-201ENST00000467232 300 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NPHP4O75161 AC103833.1-201ENST00000517442 172 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 AP003385.6-201ENST00000531603 374 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 NDUFA5P6-201ENST00000542110 379 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 AL356280.1-201ENST00000603614 379 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 AL645944.1-201ENST00000603857 493 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 AC104307.1-201ENST00000616142 196 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NPHP4O75161 RNU6-883P-201ENST00000384597 107 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 DSTNP4-201ENST00000399472 474 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 HMGB3P31-201ENST00000413333 595 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 PNRC2P1-201ENST00000423940 420 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 AL513321.1-201ENST00000441175 761 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 AC007000.2-201ENST00000442564 487 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.89□□□□□ -1.95
NPHP4O75161 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.89□□□□□ -1.95
NPHP4O75161 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.89□□□□□ -1.95
NPHP4O75161 AC006483.1-201ENST00000487308 313 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.89□□□□□ -1.95
NPHP4O75161 RPL23AP55-201ENST00000498163 452 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 AC133963.2-201ENST00000513686 578 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.89□□□□□ -1.95
NPHP4O75161 AC233266.2-201ENST00000567067 528 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 AC010735.1-201ENST00000567305 1026 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 LRRC37A5P-203ENST00000580181 585 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
NPHP4O75161 RPAP2P1-201ENST00000603626 1168 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 AC091953.2-201ENST00000623979 160 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.89□□□□□ -1.95
NPHP4O75161 AL356118.1-201ENST00000635272 1078 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 AC090897.3-201ENST00000636973 1157 ntBASIC2.89□□□□□ -1.95
NPHP4O75161 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.88□□□□□ -1.95
NPHP4O75161 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NPHP4O75161 RNA5SP27-201ENST00000363839 119 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 RNU6-1243P-201ENST00000364028 107 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 AC073264.1-201ENST00000411508 416 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 RPS15AP12-201ENST00000419498 388 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 AC244098.2-201ENST00000422068 99 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.88□□□□□ -1.95
NPHP4O75161 HMGB1P45-201ENST00000435986 653 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 RAB11AP1-201ENST00000442978 646 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 AC027673.1-201ENST00000456245 405 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 RNU6-202P-201ENST00000515998 96 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 IGKV2D-36-201ENST00000518643 226 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.88□□□□□ -1.95
NPHP4O75161 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.88□□□□□ -1.95
NPHP4O75161 AL356575.1-201ENST00000603008 283 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 AC120053.1-201ENST00000607706 736 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 AL137847.3-201ENST00000611521 109 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 STMN1P1-201ENST00000617809 440 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 AC018926.3-201ENST00000618841 406 ntBASIC2.88□□□□□ -1.95
NPHP4O75161 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPHP4O75161 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPHP4O75161 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NPHP4O75161 RNU6-600P-201ENST00000362524 99 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 RNU1-51P-201ENST00000365345 176 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NPHP4O75161 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP4O75161 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP4O75161 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP4O75161 CR769767.1-201ENST00000436337 346 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP4O75161 AC003989.2-201ENST00000440224 169 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 AC009961.3-201ENST00000449832 765 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 MTND2P3-201ENST00000452458 470 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 TPRKBP1-201ENST00000456243 481 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.87□□□□□ -1.95
NPHP4O75161 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.87□□□□□ -1.95
NPHP4O75161 AC008885.2-201ENST00000509506 930 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
NPHP4O75161 OR4R2P-201ENST00000530815 597 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.87□□□□□ -1.95
NPHP4O75161 AC027104.1-201ENST00000563702 681 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 AC005951.1-201ENST00000576706 485 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.87□□□□□ -1.95
NPHP4O75161 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.87□□□□□ -1.95
NPHP4O75161 SNRPGP15-201ENST00000600149 222 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 AC016877.3-201ENST00000606778 504 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 AC022079.2-201ENST00000619739 566 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 CYP3A51P-201ENST00000633513 256 ntBASIC2.87□□□□□ -1.95
NPHP4O75161 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
NPHP4O75161 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NPHP4O75161 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
NPHP4O75161 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.87□□□□□ -1.95
NPHP4O75161 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.87□□□□□ -1.95
NPHP4O75161 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.86□□□□□ -1.95
NPHP4O75161 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NPHP4O75161 AL109809.4-201ENST00000603520 2185 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms