Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC080125.1-201ENST00000414888 684 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 MORF4L1P7-201ENST00000426038 703 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 RPL31P54-201ENST00000429803 370 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 AC105272.1-201ENST00000438604 198 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 AC000041.1-201ENST00000439655 175 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 AL714022.1-201ENST00000439897 151 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 AC116337.2-201ENST00000477662 156 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN2BO60939 RPL37P25-201ENST00000507308 276 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 CKS1BP7-201ENST00000522230 235 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SCN2BO60939 SETP7-201ENST00000552169 453 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 NIFKP8-201ENST00000560500 874 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 LARP7P3-201ENST00000579888 337 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 MIR3616-201ENST00000584070 92 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 ELOCP29-201ENST00000588193 334 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.41□□□□□ -2.02
SCN2BO60939 RPL23AP92-201ENST00000603609 255 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 AP005137.2-201ENST00000609238 400 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 AC079395.3-201ENST00000615161 484 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 AC011330.2-201ENST00000621680 635 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.41□□□□□ -2.02
SCN2BO60939 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCN2BO60939 AC093536.2-201ENST00000565257 1406 ntBASIC2.41□□□□□ -2.02
SCN2BO60939 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.4□□□□□ -2.02
SCN2BO60939 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.4□□□□□ -2.02
SCN2BO60939 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
SCN2BO60939 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SCN2BO60939 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SCN2BO60939 RNU6-461P-201ENST00000364195 107 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 SNORA68.1-201ENST00000364537 132 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN2BO60939 RNU6-1035P-201ENST00000384477 107 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 RNU6-878P-201ENST00000384578 110 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AC007064.1-201ENST00000412238 351 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AC008173.1-201ENST00000418901 264 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 Z82209.1-201ENST00000422141 2135 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN2BO60939 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.4□□□□□ -2.03
SCN2BO60939 AL356867.1-201ENST00000429623 299 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AC005345.1-201ENST00000431868 217 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AC107083.1-201ENST00000439643 279 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AL445687.1-201ENST00000439946 251 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN2BO60939 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.4□□□□□ -2.03
SCN2BO60939 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 RBM43P1-201ENST00000476891 1081 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AC109471.1-201ENST00000511631 612 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AC034159.1-201ENST00000513885 583 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 RNU6-798P-201ENST00000516912 103 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.4□□□□□ -2.03
SCN2BO60939 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.4□□□□□ -2.03
SCN2BO60939 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.4□□□□□ -2.03
SCN2BO60939 AC008127.2-201ENST00000549925 1075 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN2BO60939 AC104229.1-201ENST00000561364 255 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.4□□□□□ -2.03
SCN2BO60939 AC090616.3-201ENST00000582184 217 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AC105224.1-201ENST00000587055 421 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 AL049779.4-201ENST00000604500 156 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 MIR7106-201ENST00000612419 65 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.4□□□□□ -2.03
SCN2BO60939 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SCN2BO60939 AP003399.1-201ENST00000637534 361 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SCN2BO60939 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.4□□□□□ -2.03
SCN2BO60939 OR4G11P-202ENST00000642116 1414 ntBASIC2.4□□□□□ -2.03
SCN2BO60939 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.4□□□□□ -2.03
SCN2BO60939 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
SCN2BO60939 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
SCN2BO60939 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SCN2BO60939 RNA5SP456-201ENST00000364002 114 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN2BO60939 AL139098.1-201ENST00000407291 389 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN2BO60939 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN2BO60939 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN2BO60939 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 AC098614.2-201ENST00000426040 255 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 KC877373.1-201ENST00000479066 408 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.39□□□□□ -2.03
SCN2BO60939 AC084024.2-201ENST00000503480 791 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN2BO60939 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN2BO60939 AC114322.1-201ENST00000506771 926 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 AC048346.1-201ENST00000510247 144 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SCN2BO60939 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.39□□□□□ -2.03
SCN2BO60939 OR5AK1P-201ENST00000524837 922 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.39□□□□□ -2.03
SCN2BO60939 GTF3AP2-201ENST00000557014 266 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 AC093519.1-201ENST00000566109 298 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 MIR3117-201ENST00000584034 78 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 TPMTP1-201ENST00000592307 737 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 VN1R90P-201ENST00000595717 726 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 AL355877.2-201ENST00000603670 358 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 AL033523.1-201ENST00000605153 153 ntBASIC2.39□□□□□ -2.03
SCN2BO60939 AL592148.2-201ENST00000612210 372 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms