Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
URB1O60287 AC022709.1-201ENST00000615967 87 ntBASIC1.61□□□□□ -2.15
URB1O60287 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
URB1O60287 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
URB1O60287 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.61□□□□□ -2.15
URB1O60287 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
URB1O60287 USP9YP27-201ENST00000418455 438 ntBASIC1.61□□□□□ -2.15
URB1O60287 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.61□□□□□ -2.15
URB1O60287 AF131216.2-201ENST00000512316 564 ntBASIC1.61□□□□□ -2.15
URB1O60287 MTND5P4-201ENST00000514978 288 ntBASIC1.61□□□□□ -2.15
URB1O60287 FAM92A1P1-201ENST00000528023 890 ntBASIC1.61□□□□□ -2.15
URB1O60287 AL161670.1-201ENST00000554348 137 ntBASIC1.61□□□□□ -2.15
URB1O60287 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.61□□□□□ -2.15
URB1O60287 AL157834.3-201ENST00000615543 103 ntBASIC1.61□□□□□ -2.15
URB1O60287 AL589935.2-201ENST00000616471 1231 ntBASIC1.61□□□□□ -2.15
URB1O60287 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.61□□□□□ -2.15
URB1O60287 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
URB1O60287 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
URB1O60287 VTRNA1-1-201ENST00000363120 99 ntBASIC1.6□□□□□ -2.15
URB1O60287 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
URB1O60287 RNA5SP37-201ENST00000365420 130 ntBASIC1.6□□□□□ -2.15
URB1O60287 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
URB1O60287 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.6□□□□□ -2.15
URB1O60287 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
URB1O60287 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.6□□□□□ -2.15
URB1O60287 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.6□□□□□ -2.15
URB1O60287 AL731537.2-201ENST00000561565 951 ntBASIC1.6□□□□□ -2.15
URB1O60287 AC090751.1-201ENST00000566966 267 ntBASIC1.6□□□□□ -2.15
URB1O60287 RNU6-342P-201ENST00000384521 104 ntBASIC1.6□□□□□ -2.15
URB1O60287 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
URB1O60287 MIR1323-201ENST00000408090 73 ntBASIC1.6□□□□□ -2.15
URB1O60287 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.6□□□□□ -2.15
URB1O60287 AC090515.1-201ENST00000465295 476 ntBASIC1.6□□□□□ -2.15
URB1O60287 AC023050.1-201ENST00000498198 304 ntBASIC1.6□□□□□ -2.15
URB1O60287 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.6□□□□□ -2.15
URB1O60287 AC021146.7-201ENST00000509604 775 ntBASIC1.6□□□□□ -2.15
URB1O60287 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
URB1O60287 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.6□□□□□ -2.15
URB1O60287 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
URB1O60287 AC098848.2-201ENST00000588023 330 ntBASIC1.6□□□□□ -2.15
URB1O60287 AL133393.1-201ENST00000603277 287 ntBASIC1.6□□□□□ -2.15
URB1O60287 HSPE1P14-201ENST00000605812 302 ntBASIC1.6□□□□□ -2.15
URB1O60287 ZNF271P-202ENST00000465539 1970 ntBASIC1.6□□□□□ -2.15
URB1O60287 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
URB1O60287 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
URB1O60287 MIR96-201ENST00000362288 78 ntBASIC1.59□□□□□ -2.15
URB1O60287 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.59□□□□□ -2.15
URB1O60287 HMGN2P20-201ENST00000437531 273 ntBASIC1.59□□□□□ -2.15
URB1O60287 AL451074.3-201ENST00000437709 472 ntBASIC1.59□□□□□ -2.15
URB1O60287 AL157827.1-201ENST00000447622 132 ntBASIC1.59□□□□□ -2.15
URB1O60287 RNU6-1218P-201ENST00000458990 108 ntBASIC1.59□□□□□ -2.15
URB1O60287 AC025033.1-201ENST00000463883 194 ntBASIC1.59□□□□□ -2.15
URB1O60287 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.59□□□□□ -2.15
URB1O60287 AC109464.2-201ENST00000510242 943 ntBASIC1.59□□□□□ -2.15
URB1O60287 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.59□□□□□ -2.15
URB1O60287 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
URB1O60287 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.59□□□□□ -2.15
URB1O60287 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.59□□□□□ -2.15
URB1O60287 MTND2P13-201ENST00000577438 1039 ntBASIC1.59□□□□□ -2.15
URB1O60287 AC103810.1-201ENST00000579873 453 ntBASIC1.59□□□□□ -2.15
URB1O60287 RNA5SP108-201ENST00000605921 117 ntBASIC1.59□□□□□ -2.15
URB1O60287 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
URB1O60287 BX649567.1-201ENST00000642071 1134 ntBASIC1.59□□□□□ -2.15
URB1O60287 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.15
URB1O60287 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
URB1O60287 ZNF876P-202ENST00000398732 1485 ntBASIC1.59□□□□□ -2.16
URB1O60287 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
URB1O60287 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
URB1O60287 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
URB1O60287 USP9YP15-201ENST00000442391 422 ntBASIC1.59□□□□□ -2.16
URB1O60287 RNU6-347P-201ENST00000516658 105 ntBASIC1.59□□□□□ -2.16
URB1O60287 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.16
URB1O60287 AC022790.1-201ENST00000522872 204 ntBASIC1.59□□□□□ -2.16
URB1O60287 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.59□□□□□ -2.16
URB1O60287 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.16
URB1O60287 AC103987.3-201ENST00000582071 292 ntBASIC1.59□□□□□ -2.16
URB1O60287 AC105429.2-201ENST00000610567 517 ntBASIC1.59□□□□□ -2.16
URB1O60287 AC092159.4-201ENST00000624944 550 ntBASIC1.59□□□□□ -2.16
URB1O60287 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
URB1O60287 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.58□□□□□ -2.16
URB1O60287 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
URB1O60287 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.58□□□□□ -2.16
URB1O60287 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.58□□□□□ -2.16
URB1O60287 AC090071.1-201ENST00000507713 644 ntBASIC1.58□□□□□ -2.16
URB1O60287 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.58□□□□□ -2.16
URB1O60287 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.58□□□□□ -2.16
URB1O60287 MIR3618-201ENST00000580330 88 ntBASIC1.58□□□□□ -2.16
URB1O60287 LLPHP1-201ENST00000603571 367 ntBASIC1.58□□□□□ -2.16
URB1O60287 AL645939.4-201ENST00000604495 135 ntBASIC1.58□□□□□ -2.16
URB1O60287 AC034102.8-201ENST00000615146 484 ntBASIC1.58□□□□□ -2.16
URB1O60287 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
URB1O60287 Y_RNA.374-201ENST00000365606 101 ntBASIC1.57□□□□□ -2.16
URB1O60287 RNU2-71P-201ENST00000411395 189 ntBASIC1.57□□□□□ -2.16
URB1O60287 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.57□□□□□ -2.16
URB1O60287 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.57□□□□□ -2.16
URB1O60287 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.57□□□□□ -2.16
URB1O60287 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.57□□□□□ -2.16
URB1O60287 AC073901.1-201ENST00000462471 408 ntBASIC1.57□□□□□ -2.16
URB1O60287 AC104435.1-201ENST00000483483 166 ntBASIC1.57□□□□□ -2.16
URB1O60287 AC107398.1-201ENST00000486904 505 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms