Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RPL29P29-201ENST00000448725 423 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AL353691.1-201ENST00000451332 387 ntBASIC3.35□□□□□ -1.87
PRKNO60260 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.35□□□□□ -1.87
PRKNO60260 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.35□□□□□ -1.87
PRKNO60260 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.35□□□□□ -1.87
PRKNO60260 RPL9P33-201ENST00000484311 566 ntBASIC3.35□□□□□ -1.87
PRKNO60260 MTND1P3-201ENST00000484956 952 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AL358832.1-201ENST00000497800 389 ntBASIC3.35□□□□□ -1.87
PRKNO60260 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRKNO60260 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.35□□□□□ -1.87
PRKNO60260 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.35□□□□□ -1.87
PRKNO60260 AC006390.1-201ENST00000508068 283 ntBASIC3.35□□□□□ -1.87
PRKNO60260 RN7SKP209-201ENST00000516888 304 ntBASIC3.35□□□□□ -1.87
PRKNO60260 RN7SKP116-201ENST00000516902 319 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.35□□□□□ -1.87
PRKNO60260 RANP9-201ENST00000519957 271 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AP003467.2-201ENST00000520175 319 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AP003122.4-201ENST00000530980 758 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AP003385.6-201ENST00000531603 374 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AC016957.1-201ENST00000534895 309 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AC107954.1-201ENST00000565906 727 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.35□□□□□ -1.87
PRKNO60260 AL669831.4-202ENST00000590817 238 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.35□□□□□ -1.87
PRKNO60260 AC010591.1-201ENST00000603941 649 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AC107304.1-201ENST00000604229 296 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AC006077.1-201ENST00000604746 343 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AC110741.2-201ENST00000605278 268 ntBASIC3.35□□□□□ -1.87
PRKNO60260 OR10AB1P-201ENST00000609613 938 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AL357559.1-201ENST00000622228 274 ntBASIC3.35□□□□□ -1.87
PRKNO60260 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PRKNO60260 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PRKNO60260 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRKNO60260 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRKNO60260 OTUD4P1-201ENST00000237841 3067 ntBASIC3.35□□□□□ -1.87
PRKNO60260 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRKNO60260 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRKNO60260 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRKNO60260 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.34□□□□□ -1.87
PRKNO60260 AL353746.1-201ENST00000566293 6881 ntBASIC3.34□□□□□ -1.87
PRKNO60260 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.34□□□□□ -1.87
PRKNO60260 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PRKNO60260 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.34□□□□□ -1.87
PRKNO60260 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PRKNO60260 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRKNO60260 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PRKNO60260 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRKNO60260 SNORD51-201ENST00000384320 80 ntBASIC3.34□□□□□ -1.87
PRKNO60260 Y_RNA.548-201ENST00000384656 105 ntBASIC3.34□□□□□ -1.87
PRKNO60260 MIR449B-201ENST00000384995 97 ntBASIC3.34□□□□□ -1.87
PRKNO60260 CCNG1P1-201ENST00000406783 885 ntBASIC3.34□□□□□ -1.87
PRKNO60260 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.34□□□□□ -1.87
PRKNO60260 RNA5SP56-201ENST00000410277 118 ntBASIC3.34□□□□□ -1.87
PRKNO60260 RNU6-195P-201ENST00000411352 109 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AC078974.1-201ENST00000411597 223 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.34□□□□□ -1.87
PRKNO60260 RPS29P4-201ENST00000414733 161 ntBASIC3.34□□□□□ -1.87
PRKNO60260 C1DP2-201ENST00000418167 426 ntBASIC3.34□□□□□ -1.87
PRKNO60260 RPL21P109-201ENST00000422213 475 ntBASIC3.34□□□□□ -1.87
PRKNO60260 OR2B8P-201ENST00000432841 938 ntBASIC3.34□□□□□ -1.87
PRKNO60260 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PRKNO60260 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.34□□□□□ -1.87
PRKNO60260 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.34□□□□□ -1.87
PRKNO60260 AL358232.1-201ENST00000448030 501 ntBASIC3.34□□□□□ -1.87
PRKNO60260 GAPDHP17-201ENST00000449858 1001 ntBASIC3.34□□□□□ -1.87
PRKNO60260 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.34□□□□□ -1.87
PRKNO60260 AP1S2P1-201ENST00000457344 379 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AC078817.1-201ENST00000492623 435 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.34□□□□□ -1.87
PRKNO60260 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.34□□□□□ -1.87
PRKNO60260 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.34□□□□□ -1.87
PRKNO60260 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.34□□□□□ -1.87
PRKNO60260 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
PRKNO60260 RN7SKP83-201ENST00000516512 178 ntBASIC3.34□□□□□ -1.87
PRKNO60260 MTND1P5-201ENST00000517906 940 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AP003181.2-201ENST00000528941 181 ntBASIC3.34□□□□□ -1.87
PRKNO60260 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.34□□□□□ -1.87
PRKNO60260 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.34□□□□□ -1.87
PRKNO60260 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PRKNO60260 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.34□□□□□ -1.87
PRKNO60260 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.34□□□□□ -1.87
PRKNO60260 EEF1B2P4-201ENST00000551398 348 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.34□□□□□ -1.87
PRKNO60260 AC027807.1-201ENST00000559921 996 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AC006270.2-201ENST00000578523 652 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AL355812.1-201ENST00000603215 216 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AC109347.2-201ENST00000610220 349 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AL590099.1-201ENST00000615276 138 ntBASIC3.34□□□□□ -1.87
PRKNO60260 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRKNO60260 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.34□□□□□ -1.87
PRKNO60260 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.34□□□□□ -1.87
PRKNO60260 AC010149.2-201ENST00000637608 315 ntBASIC3.34□□□□□ -1.87
PRKNO60260 AC099654.12-201ENST00000639868 649 ntBASIC3.34□□□□□ -1.87
PRKNO60260 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PRKNO60260 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PRKNO60260 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PRKNO60260 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRKNO60260 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PRKNO60260 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRKNO60260 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms