Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.73□□□□□ -1.97
LSM1O15116 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.73□□□□□ -1.97
LSM1O15116 ACTR3BP3-201ENST00000565577 979 ntBASIC2.73□□□□□ -1.97
LSM1O15116 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.73□□□□□ -1.97
LSM1O15116 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.73□□□□□ -1.97
LSM1O15116 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.73□□□□□ -1.97
LSM1O15116 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.73□□□□□ -1.97
LSM1O15116 AL583856.2-201ENST00000606298 543 ntBASIC2.73□□□□□ -1.97
LSM1O15116 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.73□□□□□ -1.97
LSM1O15116 AC006927.2-201ENST00000639256 389 ntBASIC2.73□□□□□ -1.97
LSM1O15116 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LSM1O15116 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LSM1O15116 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.73□□□□□ -1.97
LSM1O15116 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LSM1O15116 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
LSM1O15116 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.72□□□□□ -1.97
LSM1O15116 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LSM1O15116 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.72□□□□□ -1.97
LSM1O15116 RNA5SP374-201ENST00000362939 125 ntBASIC2.72□□□□□ -1.97
LSM1O15116 Y_RNA.110-201ENST00000363220 99 ntBASIC2.72□□□□□ -1.97
LSM1O15116 MIR23B-201ENST00000384832 97 ntBASIC2.72□□□□□ -1.97
LSM1O15116 SNORA48.5-201ENST00000391143 135 ntBASIC2.72□□□□□ -1.97
LSM1O15116 RPS3AP24-201ENST00000407896 734 ntBASIC2.72□□□□□ -1.97
LSM1O15116 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LSM1O15116 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.72□□□□□ -1.97
LSM1O15116 AC090774.1-201ENST00000435925 246 ntBASIC2.72□□□□□ -1.97
LSM1O15116 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.72□□□□□ -1.97
LSM1O15116 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.72□□□□□ -1.97
LSM1O15116 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.72□□□□□ -1.97
LSM1O15116 AC090453.1-201ENST00000495560 436 ntBASIC2.72□□□□□ -1.97
LSM1O15116 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.72□□□□□ -1.97
LSM1O15116 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.72□□□□□ -1.97
LSM1O15116 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.72□□□□□ -1.97
LSM1O15116 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
LSM1O15116 SNORA31.22-201ENST00000517204 135 ntBASIC2.72□□□□□ -1.97
LSM1O15116 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.72□□□□□ -1.97
LSM1O15116 AP003168.1-201ENST00000530091 307 ntBASIC2.72□□□□□ -1.97
LSM1O15116 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LSM1O15116 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.72□□□□□ -1.97
LSM1O15116 HPRT1P3-201ENST00000539521 576 ntBASIC2.72□□□□□ -1.97
LSM1O15116 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LSM1O15116 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.72□□□□□ -1.97
LSM1O15116 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.72□□□□□ -1.97
LSM1O15116 MIR4637-201ENST00000582405 84 ntBASIC2.72□□□□□ -1.97
LSM1O15116 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.72□□□□□ -1.97
LSM1O15116 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.72□□□□□ -1.97
LSM1O15116 AL035411.2-201ENST00000604022 421 ntBASIC2.72□□□□□ -1.97
LSM1O15116 AC025588.4-201ENST00000615802 908 ntBASIC2.72□□□□□ -1.97
LSM1O15116 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.72□□□□□ -1.97
LSM1O15116 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.72□□□□□ -1.97
LSM1O15116 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
LSM1O15116 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
LSM1O15116 AC012321.1-201ENST00000561622 1588 ntBASIC2.71□□□□□ -1.98
LSM1O15116 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.98
LSM1O15116 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LSM1O15116 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LSM1O15116 Y_RNA.25-201ENST00000362528 102 ntBASIC2.71□□□□□ -1.98
LSM1O15116 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LSM1O15116 RNU6-851P-201ENST00000384565 107 ntBASIC2.71□□□□□ -1.98
LSM1O15116 MIR592-201ENST00000384959 97 ntBASIC2.71□□□□□ -1.98
LSM1O15116 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
LSM1O15116 RPS4XP7-201ENST00000406274 780 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.71□□□□□ -1.98
LSM1O15116 NDUFB4P7-201ENST00000423198 363 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC019178.2-201ENST00000423595 505 ntBASIC2.71□□□□□ -1.98
LSM1O15116 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC092573.2-201ENST00000434546 243 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AL513043.1-201ENST00000439124 535 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC112653.1-201ENST00000443851 386 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC005297.2-201ENST00000450430 606 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC079776.3-201ENST00000450665 370 ntBASIC2.71□□□□□ -1.98
LSM1O15116 NIPA2P5-201ENST00000452282 464 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AL049714.1-201ENST00000466686 347 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AL135752.1-201ENST00000479477 471 ntBASIC2.71□□□□□ -1.98
LSM1O15116 RN7SL297P-201ENST00000483161 293 ntBASIC2.71□□□□□ -1.98
LSM1O15116 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.71□□□□□ -1.98
LSM1O15116 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.71□□□□□ -1.98
LSM1O15116 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LSM1O15116 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.71□□□□□ -1.98
LSM1O15116 AP001189.2-201ENST00000527320 189 ntBASIC2.71□□□□□ -1.98
LSM1O15116 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LSM1O15116 AP003066.2-201ENST00000529375 555 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC024224.1-201ENST00000538284 609 ntBASIC2.71□□□□□ -1.98
LSM1O15116 CYB5AP5-201ENST00000549779 389 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AL136520.1-202ENST00000555494 763 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.71□□□□□ -1.98
LSM1O15116 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM1O15116 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.71□□□□□ -1.98
LSM1O15116 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.71□□□□□ -1.98
LSM1O15116 AC023825.1-201ENST00000566704 1030 ntBASIC2.71□□□□□ -1.98
LSM1O15116 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.71□□□□□ -1.98
LSM1O15116 AC004853.1-201ENST00000604902 698 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AL137843.1-201ENST00000605078 385 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.71□□□□□ -1.98
LSM1O15116 AC005046.1-201ENST00000608515 625 ntBASIC2.71□□□□□ -1.98
LSM1O15116 TUG1_1.1-201ENST00000610654 145 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC104237.2-201ENST00000612456 443 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AC107308.1-201ENST00000615897 301 ntBASIC2.71□□□□□ -1.98
LSM1O15116 AL596245.1-201ENST00000618994 362 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms