Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.72□□□□□ -1.97
CHD2O14647 AL353746.1-201ENST00000566293 6881 ntBASIC2.72□□□□□ -1.97
CHD2O14647 AC004022.2-201ENST00000413824 193 ntBASIC2.72□□□□□ -1.97
CHD2O14647 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.72□□□□□ -1.97
CHD2O14647 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.72□□□□□ -1.97
CHD2O14647 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.72□□□□□ -1.97
CHD2O14647 AC104472.2-201ENST00000469035 601 ntBASIC2.72□□□□□ -1.97
CHD2O14647 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.72□□□□□ -1.97
CHD2O14647 AC034102.8-201ENST00000615146 484 ntBASIC2.72□□□□□ -1.97
CHD2O14647 AC084768.2-201ENST00000622736 221 ntBASIC2.72□□□□□ -1.97
CHD2O14647 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.72□□□□□ -1.97
CHD2O14647 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.72□□□□□ -1.97
CHD2O14647 AC007256.1-201ENST00000392253 2765 ntBASIC2.72□□□□□ -1.97
CHD2O14647 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
CHD2O14647 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHD2O14647 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHD2O14647 RNU4-74P-201ENST00000411280 161 ntBASIC2.71□□□□□ -1.98
CHD2O14647 RPL23AP39-201ENST00000415533 405 ntBASIC2.71□□□□□ -1.98
CHD2O14647 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.71□□□□□ -1.98
CHD2O14647 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.71□□□□□ -1.98
CHD2O14647 AC009237.8-201ENST00000445492 379 ntBASIC2.71□□□□□ -1.98
CHD2O14647 AP002345.1-201ENST00000456493 928 ntBASIC2.71□□□□□ -1.98
CHD2O14647 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.71□□□□□ -1.98
CHD2O14647 AP000852.1-201ENST00000472460 573 ntBASIC2.71□□□□□ -1.98
CHD2O14647 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.71□□□□□ -1.98
CHD2O14647 FAM92A1P1-201ENST00000528023 890 ntBASIC2.71□□□□□ -1.98
CHD2O14647 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.71□□□□□ -1.98
CHD2O14647 AC009220.3-201ENST00000604318 586 ntBASIC2.71□□□□□ -1.98
CHD2O14647 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.71□□□□□ -1.98
CHD2O14647 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.71□□□□□ -1.98
CHD2O14647 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CHD2O14647 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.7□□□□□ -1.98
CHD2O14647 SNORA51.2-201ENST00000364595 132 ntBASIC2.7□□□□□ -1.98
CHD2O14647 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD2O14647 AL009174.1-201ENST00000426577 416 ntBASIC2.7□□□□□ -1.98
CHD2O14647 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD2O14647 RPL23AP58-201ENST00000440453 469 ntBASIC2.7□□□□□ -1.98
CHD2O14647 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.7□□□□□ -1.98
CHD2O14647 AL034418.1-201ENST00000448675 860 ntBASIC2.7□□□□□ -1.98
CHD2O14647 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.7□□□□□ -1.98
CHD2O14647 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.7□□□□□ -1.98
CHD2O14647 AC110792.2-201ENST00000510278 224 ntBASIC2.7□□□□□ -1.98
CHD2O14647 MTCYBP37-201ENST00000510642 1133 ntBASIC2.7□□□□□ -1.98
CHD2O14647 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.7□□□□□ -1.98
CHD2O14647 AC245128.3-201ENST00000594721 748 ntBASIC2.7□□□□□ -1.98
CHD2O14647 SNRPGP19-201ENST00000603826 189 ntBASIC2.7□□□□□ -1.98
CHD2O14647 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD2O14647 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD2O14647 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CHD2O14647 FGF7P8-201ENST00000402994 292 ntBASIC2.7□□□□□ -1.98
CHD2O14647 MTATP6P31-201ENST00000406985 692 ntBASIC2.7□□□□□ -1.98
CHD2O14647 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.7□□□□□ -1.98
CHD2O14647 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.7□□□□□ -1.98
CHD2O14647 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.7□□□□□ -1.98
CHD2O14647 SYPL1P1-201ENST00000473622 768 ntBASIC2.7□□□□□ -1.98
CHD2O14647 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.7□□□□□ -1.98
CHD2O14647 C1DP5-201ENST00000525775 383 ntBASIC2.7□□□□□ -1.98
CHD2O14647 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.7□□□□□ -1.98
CHD2O14647 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.7□□□□□ -1.98
CHD2O14647 AC010735.1-201ENST00000567305 1026 ntBASIC2.7□□□□□ -1.98
CHD2O14647 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.7□□□□□ -1.98
CHD2O14647 CBX3P2-202ENST00000583365 535 ntBASIC2.7□□□□□ -1.98
CHD2O14647 SUMO2P14-201ENST00000604488 293 ntBASIC2.7□□□□□ -1.98
CHD2O14647 AC010678.1-201ENST00000614118 713 ntBASIC2.7□□□□□ -1.98
CHD2O14647 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHD2O14647 Y_RNA.355-201ENST00000365462 98 ntBASIC2.69□□□□□ -1.98
CHD2O14647 HMGB1P10-201ENST00000395823 563 ntBASIC2.69□□□□□ -1.98
CHD2O14647 AL138880.1-201ENST00000405824 642 ntBASIC2.69□□□□□ -1.98
CHD2O14647 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.69□□□□□ -1.98
CHD2O14647 NUP35P2-201ENST00000416748 943 ntBASIC2.69□□□□□ -1.98
CHD2O14647 MTCYBP24-201ENST00000420387 1106 ntBASIC2.69□□□□□ -1.98
CHD2O14647 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.69□□□□□ -1.98
CHD2O14647 RPS7P2-201ENST00000435134 607 ntBASIC2.69□□□□□ -1.98
CHD2O14647 AL590762.3-201ENST00000436372 640 ntBASIC2.69□□□□□ -1.98
CHD2O14647 SDR42E1P3-201ENST00000438345 502 ntBASIC2.69□□□□□ -1.98
CHD2O14647 AL591719.1-201ENST00000444669 744 ntBASIC2.69□□□□□ -1.98
CHD2O14647 RNF138P1-201ENST00000502765 546 ntBASIC2.69□□□□□ -1.98
CHD2O14647 RNU1-61P-201ENST00000516107 151 ntBASIC2.69□□□□□ -1.98
CHD2O14647 HAUS1P3-201ENST00000523909 662 ntBASIC2.69□□□□□ -1.98
CHD2O14647 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.69□□□□□ -1.98
CHD2O14647 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.69□□□□□ -1.98
CHD2O14647 RPP40P2-201ENST00000603596 712 ntBASIC2.69□□□□□ -1.98
CHD2O14647 AC018618.2-201ENST00000604770 446 ntBASIC2.69□□□□□ -1.98
CHD2O14647 AC025016.1-201ENST00000616746 682 ntBASIC2.69□□□□□ -1.98
CHD2O14647 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.69□□□□□ -1.98
CHD2O14647 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHD2O14647 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHD2O14647 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CHD2O14647 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.68□□□□□ -1.98
CHD2O14647 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHD2O14647 RNU6-1293P-201ENST00000384077 107 ntBASIC2.68□□□□□ -1.98
CHD2O14647 Y_RNA.466-201ENST00000384294 113 ntBASIC2.68□□□□□ -1.98
CHD2O14647 RPL7P46-201ENST00000425129 740 ntBASIC2.68□□□□□ -1.98
CHD2O14647 HMGB1P12-201ENST00000438594 598 ntBASIC2.68□□□□□ -1.98
CHD2O14647 AC006483.1-201ENST00000487308 313 ntBASIC2.68□□□□□ -1.98
CHD2O14647 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.68□□□□□ -1.98
CHD2O14647 CIR1P1-201ENST00000524055 1133 ntBASIC2.68□□□□□ -1.98
CHD2O14647 MTND2P26-201ENST00000528255 1029 ntBASIC2.68□□□□□ -1.98
CHD2O14647 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.68□□□□□ -1.98
CHD2O14647 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms