Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC104564.1-201ENST00000493028 407 ntBASIC5.27□□□□□ -1.57
SOX1O00570 AC021146.3-201ENST00000511911 260 ntBASIC5.27□□□□□ -1.57
SOX1O00570 TBCAP3-201ENST00000512475 312 ntBASIC5.27□□□□□ -1.57
SOX1O00570 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX1O00570 Y_RNA.668-201ENST00000516233 93 ntBASIC5.27□□□□□ -1.57
SOX1O00570 SCARNA20.4-201ENST00000516969 131 ntBASIC5.27□□□□□ -1.57
SOX1O00570 AC105031.1-201ENST00000518550 476 ntBASIC5.27□□□□□ -1.57
SOX1O00570 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX1O00570 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.27□□□□□ -1.57
SOX1O00570 AC123786.2-201ENST00000603459 275 ntBASIC5.27□□□□□ -1.57
SOX1O00570 U2.1-201ENST00000618978 145 ntBASIC5.27□□□□□ -1.57
SOX1O00570 AC074140.1-201ENST00000621617 208 ntBASIC5.27□□□□□ -1.57
SOX1O00570 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX1O00570 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX1O00570 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SOX1O00570 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.27□□□□□ -1.57
SOX1O00570 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX1O00570 AC008758.3-201ENST00000507003 1829 ntBASIC5.27□□□□□ -1.57
SOX1O00570 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX1O00570 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX1O00570 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 AC025031.4-201ENST00000621248 3271 ntBASIC5.26□□□□□ -1.57
SOX1O00570 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SOX1O00570 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SOX1O00570 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.26□□□□□ -1.57
SOX1O00570 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SOX1O00570 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.26□□□□□ -1.57
SOX1O00570 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 SPRR2C-201ENST00000290702 219 ntBASIC5.26□□□□□ -1.57
SOX1O00570 RNU6-637P-201ENST00000384050 107 ntBASIC5.26□□□□□ -1.57
SOX1O00570 RNU6-393P-201ENST00000384475 107 ntBASIC5.26□□□□□ -1.57
SOX1O00570 RN7SKP177-201ENST00000410567 355 ntBASIC5.26□□□□□ -1.57
SOX1O00570 RPLP0P7-201ENST00000416050 667 ntBASIC5.26□□□□□ -1.57
SOX1O00570 AL590399.2-201ENST00000427536 309 ntBASIC5.26□□□□□ -1.57
SOX1O00570 AL669831.1-202ENST00000428504 417 ntBASIC5.26□□□□□ -1.57
SOX1O00570 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.26□□□□□ -1.57
SOX1O00570 CYCSP24-201ENST00000445119 316 ntBASIC5.26□□□□□ -1.57
SOX1O00570 SUMO1P2-201ENST00000452524 304 ntBASIC5.26□□□□□ -1.57
SOX1O00570 snoU13.29-201ENST00000459370 104 ntBASIC5.26□□□□□ -1.57
SOX1O00570 AC053481.1-201ENST00000467217 306 ntBASIC5.26□□□□□ -1.57
SOX1O00570 AC104472.2-201ENST00000469035 601 ntBASIC5.26□□□□□ -1.57
SOX1O00570 AC107222.1-201ENST00000510899 637 ntBASIC5.26□□□□□ -1.57
SOX1O00570 AC016065.2-201ENST00000514530 444 ntBASIC5.26□□□□□ -1.57
SOX1O00570 RNU6-27P-201ENST00000516146 107 ntBASIC5.26□□□□□ -1.57
SOX1O00570 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX1O00570 SETP7-201ENST00000552169 453 ntBASIC5.26□□□□□ -1.57
SOX1O00570 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.26□□□□□ -1.57
SOX1O00570 HNRNPCP4-201ENST00000571636 900 ntBASIC5.26□□□□□ -1.57
SOX1O00570 AC007566.2-201ENST00000603642 413 ntBASIC5.26□□□□□ -1.57
SOX1O00570 AL670379.4-201ENST00000605279 254 ntBASIC5.26□□□□□ -1.57
SOX1O00570 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
SOX1O00570 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
SOX1O00570 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
SOX1O00570 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SOX1O00570 AP000432.2-201ENST00000624164 2048 ntBASIC5.26□□□□□ -1.57
SOX1O00570 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SOX1O00570 MTCO1P24-201ENST00000515438 1558 ntBASIC5.25□□□□□ -1.57
SOX1O00570 AC116667.1-201ENST00000604855 2072 ntBASIC5.25□□□□□ -1.57
SOX1O00570 AC097461.1-201ENST00000568928 2821 ntBASIC5.25□□□□□ -1.57
SOX1O00570 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX1O00570 MIR372-201ENST00000362225 67 ntBASIC5.25□□□□□ -1.57
SOX1O00570 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX1O00570 RNU6-946P-201ENST00000383878 107 ntBASIC5.25□□□□□ -1.57
SOX1O00570 RNU1-74P-201ENST00000384108 171 ntBASIC5.25□□□□□ -1.57
SOX1O00570 RNU6-434P-201ENST00000384376 107 ntBASIC5.25□□□□□ -1.57
SOX1O00570 SNORA16.2-201ENST00000390991 127 ntBASIC5.25□□□□□ -1.57
SOX1O00570 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX1O00570 RNU6-101P-201ENST00000410323 104 ntBASIC5.25□□□□□ -1.57
SOX1O00570 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.25□□□□□ -1.57
SOX1O00570 RPS5P7-201ENST00000456664 608 ntBASIC5.25□□□□□ -1.57
SOX1O00570 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX1O00570 AC245028.2-201ENST00000458673 253 ntBASIC5.25□□□□□ -1.57
SOX1O00570 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.25□□□□□ -1.57
SOX1O00570 AC105137.1-201ENST00000484355 562 ntBASIC5.25□□□□□ -1.57
SOX1O00570 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX1O00570 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.25□□□□□ -1.57
SOX1O00570 RNU6-1332P-201ENST00000516666 104 ntBASIC5.25□□□□□ -1.57
SOX1O00570 IGLVIV-65-201ENST00000517313 360 ntBASIC5.25□□□□□ -1.57
SOX1O00570 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.25□□□□□ -1.57
SOX1O00570 DYNLL1P4-201ENST00000549314 266 ntBASIC5.25□□□□□ -1.57
SOX1O00570 MIR3200-201ENST00000580767 85 ntBASIC5.25□□□□□ -1.57
SOX1O00570 AC020634.1-201ENST00000608701 549 ntBASIC5.25□□□□□ -1.57
SOX1O00570 AC107871.2-201ENST00000612894 502 ntBASIC5.25□□□□□ -1.57
SOX1O00570 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.25□□□□□ -1.57
SOX1O00570 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX1O00570 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SOX1O00570 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
SOX1O00570 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX1O00570 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SOX1O00570 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX1O00570 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.25□□□□□ -1.57
SOX1O00570 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms