Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC124283.4-201ENST00000581815 456 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 AC012493.3-201ENST00000604494 112 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 ZNF519P1-201ENST00000449011 1626 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HMGN4O00479 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
HMGN4O00479 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
HMGN4O00479 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
HMGN4O00479 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
HMGN4O00479 RNA5SP252-201ENST00000391131 119 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 OR51A3P-201ENST00000413596 924 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGN4O00479 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.56□□□□□ -2.16
HMGN4O00479 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.56□□□□□ -2.16
HMGN4O00479 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.56□□□□□ -2.16
HMGN4O00479 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGN4O00479 RPL23AP63-201ENST00000498752 471 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.56□□□□□ -2.16
HMGN4O00479 AC114322.1-201ENST00000506771 926 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 RPL23AP94-201ENST00000512518 302 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 SNORA31.20-201ENST00000517111 133 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 AK6P1-201ENST00000540219 478 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGN4O00479 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.56□□□□□ -2.16
HMGN4O00479 MIR3122-201ENST00000577243 73 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 AC008739.2-201ENST00000597006 317 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.56□□□□□ -2.16
HMGN4O00479 VN1R78P-201ENST00000597393 564 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 OR1S1-201ENST00000624470 978 ntBASIC1.56□□□□□ -2.16
HMGN4O00479 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
HMGN4O00479 RNU1-52P-201ENST00000384190 164 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGN4O00479 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.55□□□□□ -2.16
HMGN4O00479 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.55□□□□□ -2.16
HMGN4O00479 TRBV1-201ENST00000476502 284 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 AC108734.3-201ENST00000481241 1165 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 MRPL42P6-201ENST00000486397 371 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 AC011352.3-201ENST00000505162 593 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 AC025768.1-201ENST00000510057 267 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.55□□□□□ -2.16
HMGN4O00479 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGN4O00479 RNU6-319P-201ENST00000516025 108 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGN4O00479 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGN4O00479 MIR4513-201ENST00000581077 86 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMGN4O00479 AL138880.2-201ENST00000616214 239 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 MIR6076-201ENST00000617521 113 ntBASIC1.55□□□□□ -2.16
HMGN4O00479 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGN4O00479 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.55□□□□□ -2.16
HMGN4O00479 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.55□□□□□ -2.16
HMGN4O00479 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMGN4O00479 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
HMGN4O00479 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.55□□□□□ -2.16
HMGN4O00479 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMGN4O00479 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
HMGN4O00479 AL121972.1-201ENST00000402023 252 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.54□□□□□ -2.16
HMGN4O00479 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.54□□□□□ -2.16
HMGN4O00479 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGN4O00479 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AL358453.1-201ENST00000422522 250 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.54□□□□□ -2.16
HMGN4O00479 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.54□□□□□ -2.16
HMGN4O00479 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGN4O00479 snoU13.4-201ENST00000458916 104 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC022493.1-201ENST00000492984 337 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC104564.1-201ENST00000493028 407 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.54□□□□□ -2.16
HMGN4O00479 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.54□□□□□ -2.16
HMGN4O00479 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGN4O00479 AC109471.1-201ENST00000511631 612 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 RNU6-250P-201ENST00000516958 103 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 HMGB1P1-201ENST00000522557 636 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.54□□□□□ -2.16
HMGN4O00479 MTCO1P47-201ENST00000523889 1271 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC068339.2-201ENST00000534395 618 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.54□□□□□ -2.16
HMGN4O00479 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGN4O00479 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGN4O00479 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.54□□□□□ -2.16
HMGN4O00479 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
HMGN4O00479 OR4K8P-201ENST00000578842 1048 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC090616.3-201ENST00000582184 217 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC092474.3-201ENST00000603022 568 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AP004372.1-201ENST00000604842 844 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC009570.1-201ENST00000609599 745 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 MIR6845-201ENST00000613182 61 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AC018755.4-201ENST00000619715 454 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AL133370.2-201ENST00000619934 439 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 AL049737.1-201ENST00000413920 1403 ntBASIC1.54□□□□□ -2.16
HMGN4O00479 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGN4O00479 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
HMGN4O00479 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
HMGN4O00479 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMGN4O00479 RNU6-1251P-201ENST00000364502 107 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 Z75741.2-201ENST00000417272 1167 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 AC234782.4-201ENST00000417646 1048 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 RPL21P32-201ENST00000419877 477 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms