Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC28A1O00337 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.07□□□□□ -1.92
SLC28A1O00337 TUSC7.1-201ENST00000610969 165 ntBASIC3.07□□□□□ -1.92
SLC28A1O00337 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
SLC28A1O00337 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.07□□□□□ -1.92
SLC28A1O00337 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.07□□□□□ -1.92
SLC28A1O00337 AC009268.2-201ENST00000621925 457 ntBASIC3.07□□□□□ -1.92
SLC28A1O00337 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.07□□□□□ -1.92
SLC28A1O00337 AC034229.5-201ENST00000624258 185 ntBASIC3.07□□□□□ -1.92
SLC28A1O00337 AC012442.3-202ENST00000636742 206 ntBASIC3.07□□□□□ -1.92
SLC28A1O00337 AC103706.2-201ENST00000638080 240 ntBASIC3.07□□□□□ -1.92
SLC28A1O00337 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
SLC28A1O00337 MAPK10-362ENST00000641864 4484 ntBASIC3.07□□□□□ -1.92
SLC28A1O00337 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SLC28A1O00337 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
SLC28A1O00337 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SLC28A1O00337 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
SLC28A1O00337 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC28A1O00337 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC28A1O00337 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC28A1O00337 OR1S2-201ENST00000302592 978 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 RNU5E-8P-201ENST00000363502 116 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 RNU6-853P-201ENST00000364306 107 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 SNORA62.3-201ENST00000365110 153 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC28A1O00337 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC28A1O00337 SNORA46-201ENST00000384762 135 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 RNU6-1197P-201ENST00000391183 107 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC28A1O00337 RPL21P3-201ENST00000395517 478 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 PTMAP2-201ENST00000397627 327 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC28A1O00337 AL356967.1-201ENST00000406305 431 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 RN7SKP266-201ENST00000410232 287 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 MTCO1P17-201ENST00000411522 491 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC28A1O00337 OR2B8P-201ENST00000432841 938 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 AC005019.1-201ENST00000436455 431 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AL117351.1-201ENST00000438864 766 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC28A1O00337 UQCRHP3-201ENST00000451503 251 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC28A1O00337 RPL32P34-201ENST00000486380 400 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 RN7SL283P-201ENST00000489055 303 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 AC104685.1-201ENST00000502445 371 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC147055.4-201ENST00000504399 745 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC28A1O00337 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC007458.1-201ENST00000542812 373 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC28A1O00337 MIR2682-201ENST00000580305 110 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AL031281.1-201ENST00000604049 488 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 AC025588.2-201ENST00000604851 466 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC079597.1-201ENST00000624306 508 ntBASIC3.06□□□□□ -1.92
SLC28A1O00337 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SLC28A1O00337 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC28A1O00337 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SLC28A1O00337 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC28A1O00337 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC28A1O00337 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
SLC28A1O00337 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC28A1O00337 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SLC28A1O00337 U3.20-201ENST00000390909 217 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC28A1O00337 AL354719.1-201ENST00000406535 843 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 AC245054.2-201ENST00000415639 319 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 RPS24P7-201ENST00000416921 246 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC28A1O00337 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC28A1O00337 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC28A1O00337 TRIAP1P1-201ENST00000427062 225 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC28A1O00337 AL356867.1-201ENST00000429623 299 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 AC091286.1-201ENST00000431233 461 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 HMGN2P31-201ENST00000432430 273 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC28A1O00337 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC28A1O00337 AP000542.1-201ENST00000448473 371 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.05□□□□□ -1.92
SLC28A1O00337 RN7SL542P-201ENST00000467147 294 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 AL049874.1-201ENST00000489560 388 ntBASIC3.05□□□□□ -1.92
SLC28A1O00337 AC034222.1-201ENST00000494052 532 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms