Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC006499.6-201ENST00000511169 607 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 HMGB1P19-201ENST00000517578 577 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 COX6B1P6-201ENST00000522347 255 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AP000889.1-201ENST00000530968 660 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.8□□□□□ -1.64
RFXAPO00287 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.8□□□□□ -1.64
RFXAPO00287 MIR4790-201ENST00000577799 79 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 SNORD39.2-201ENST00000579995 76 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 MIR3936-201ENST00000584304 110 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.8□□□□□ -1.64
RFXAPO00287 GLUD1P4-201ENST00000590914 418 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.8□□□□□ -1.64
RFXAPO00287 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.8□□□□□ -1.64
RFXAPO00287 AC012468.1-201ENST00000604888 430 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AC113403.1-201ENST00000604910 193 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AC018889.1-201ENST00000605372 397 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AC099669.2-201ENST00000616549 437 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.8□□□□□ -1.64
RFXAPO00287 AC091953.5-201ENST00000622919 233 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.8□□□□□ -1.64
RFXAPO00287 CDRT1-208ENST00000630868 794 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.8□□□□□ -1.64
RFXAPO00287 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.8□□□□□ -1.64
RFXAPO00287 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RFXAPO00287 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.8□□□□□ -1.64
RFXAPO00287 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.8□□□□□ -1.64
RFXAPO00287 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RFXAPO00287 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.8□□□□□ -1.64
RFXAPO00287 DDX18P4-201ENST00000511690 1966 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.8□□□□□ -1.64
RFXAPO00287 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 AL049641.1-201ENST00000441055 1948 ntBASIC4.8□□□□□ -1.64
RFXAPO00287 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFXAPO00287 AC008079.2-201ENST00000623543 20396 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RFXAPO00287 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.79□□□□□ -1.64
RFXAPO00287 AC004972.1-201ENST00000623934 2209 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 RNA5SP513-201ENST00000364648 118 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFXAPO00287 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFXAPO00287 RNU6-903P-201ENST00000391270 109 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AL136131.1-201ENST00000406079 803 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 RNU2-36P-201ENST00000410361 191 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 Y_RNA.646-201ENST00000410980 101 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AC074085.1-201ENST00000413598 418 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AC093578.1-201ENST00000415219 368 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 PDSS1P1-201ENST00000422953 1114 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AC018865.2-201ENST00000423631 129 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 YME1L1P1-201ENST00000429435 297 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.79□□□□□ -1.64
RFXAPO00287 RPL23AP43-201ENST00000446445 471 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AP1S2P1-201ENST00000457344 379 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.79□□□□□ -1.64
RFXAPO00287 AL049714.1-201ENST00000466686 347 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 RPS20P21-201ENST00000466859 343 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.79□□□□□ -1.64
RFXAPO00287 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.79□□□□□ -1.64
RFXAPO00287 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.79□□□□□ -1.64
RFXAPO00287 AC110794.1-201ENST00000505816 425 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AC016559.2-201ENST00000510759 359 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AC008562.1-201ENST00000521763 330 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AC128657.1-201ENST00000549459 145 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 TVP23BP1-201ENST00000557500 617 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AC124068.1-201ENST00000563131 678 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 RN7SL703P-201ENST00000578485 302 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 MIR4424-201ENST00000585257 86 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 UBE2L4-201ENST00000587688 464 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.79□□□□□ -1.64
RFXAPO00287 AC006272.2-201ENST00000594725 163 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.79□□□□□ -1.64
RFXAPO00287 AL022099.1-201ENST00000604551 712 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 OR6R2P-201ENST00000609216 300 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFXAPO00287 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFXAPO00287 AC007546.1-201ENST00000619452 559 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 MIR8059-201ENST00000620427 81 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.79□□□□□ -1.64
RFXAPO00287 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.79□□□□□ -1.64
RFXAPO00287 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFXAPO00287 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFXAPO00287 MTND5P30-201ENST00000452896 1731 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.79□□□□□ -1.64
RFXAPO00287 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RFXAPO00287 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFXAPO00287 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.79□□□□□ -1.64
RFXAPO00287 PNPT1P2-201ENST00000456768 2050 ntBASIC4.79□□□□□ -1.64
RFXAPO00287 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFXAPO00287 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.79□□□□□ -1.64
RFXAPO00287 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.78□□□□□ -1.64
RFXAPO00287 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFXAPO00287 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFXAPO00287 MUC2-202ENST00000613187 4845 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFXAPO00287 MTND5P27-201ENST00000428871 1720 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.78□□□□□ -1.64
RFXAPO00287 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms