Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.82□□□□□ -1.48
CFAP99D6REC4 MIR2117-201ENST00000516780 80 ntBASIC5.82□□□□□ -1.48
CFAP99D6REC4 AC008489.1-201ENST00000524271 483 ntBASIC5.82□□□□□ -1.48
CFAP99D6REC4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CFAP99D6REC4 CBX3P4-201ENST00000538909 354 ntBASIC5.82□□□□□ -1.48
CFAP99D6REC4 TRAV37-201ENST00000553906 342 ntBASIC5.82□□□□□ -1.48
CFAP99D6REC4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.82□□□□□ -1.48
CFAP99D6REC4 AC006115.2-201ENST00000596823 202 ntBASIC5.82□□□□□ -1.48
CFAP99D6REC4 Y_RNA.772-201ENST00000606692 102 ntBASIC5.82□□□□□ -1.48
CFAP99D6REC4 AC009318.2-201ENST00000610917 651 ntBASIC5.82□□□□□ -1.48
CFAP99D6REC4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CFAP99D6REC4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CFAP99D6REC4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CFAP99D6REC4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CFAP99D6REC4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CFAP99D6REC4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CFAP99D6REC4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CFAP99D6REC4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.82□□□□□ -1.48
CFAP99D6REC4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CFAP99D6REC4 AL138820.1-201ENST00000617901 5305 ntBASIC5.82□□□□□ -1.48
CFAP99D6REC4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CFAP99D6REC4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CFAP99D6REC4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CFAP99D6REC4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CFAP99D6REC4 ADAM24P-201ENST00000398655 2101 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 AP001284.1-201ENST00000528393 2118 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 AC005224.3-201ENST00000584683 2140 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CFAP99D6REC4 PABPC1P6-201ENST00000445594 1829 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CFAP99D6REC4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CFAP99D6REC4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CFAP99D6REC4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 UBE2L2-201ENST00000254302 429 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 Y_RNA.33-201ENST00000362591 102 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 RNA5SP477-201ENST00000362639 119 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 Y_RNA.199-201ENST00000364014 102 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 RNU6-125P-201ENST00000384505 107 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 Y_RNA.581-201ENST00000391017 97 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 MIR190B-201ENST00000401119 79 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 TOMM22P4-201ENST00000511318 336 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 Y_RNA.667-201ENST00000516212 107 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 AP002392.1-201ENST00000537692 208 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 BNIP3P5-201ENST00000562290 498 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 MIR4260-201ENST00000583107 67 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 AC010620.2-201ENST00000600135 313 ntBASIC5.81□□□□□ -1.48
CFAP99D6REC4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.81□□□□□ -1.48
CFAP99D6REC4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CFAP99D6REC4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CFAP99D6REC4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CFAP99D6REC4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 AP001148.1-201ENST00000624124 2359 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 AC026523.2-201ENST00000625039 7739 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CFAP99D6REC4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CFAP99D6REC4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CFAP99D6REC4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CFAP99D6REC4 AC007685.1-201ENST00000329806 452 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 RNA5SP240-201ENST00000365355 128 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 RNY3P4-201ENST00000384428 101 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 AL513331.1-201ENST00000411908 397 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 DPPA2P2-201ENST00000418220 897 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 AL035660.1-201ENST00000422041 222 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 AC098831.1-201ENST00000440661 216 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 GEMIN8P3-201ENST00000445417 720 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 AL590399.6-201ENST00000446396 307 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CFAP99D6REC4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 AL445433.1-201ENST00000457507 257 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 AC010469.2-201ENST00000496412 480 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 RPS24P16-201ENST00000497294 392 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 SERF1AP1-201ENST00000514575 187 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 RNA5SP438-201ENST00000516561 112 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 AP002770.2-201ENST00000543613 532 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 AC136932.1-201ENST00000574771 208 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 AC022884.2-201ENST00000578535 580 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 U2.14-201ENST00000615943 113 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 U6.92-201ENST00000636464 89 ntBASIC5.8□□□□□ -1.48
CFAP99D6REC4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CFAP99D6REC4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CFAP99D6REC4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CFAP99D6REC4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms