Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRBV27A0A0K0K1C4 AC130650.2-201ENST00000618736 2403 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 MTCO1P6-201ENST00000481192 1384 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 RNU6-819P-201ENST00000364116 107 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 OR5H15-201ENST00000383696 930 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 RNU6-921P-201ENST00000384361 107 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 MIR34A-201ENST00000385130 110 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 Z86062.1-201ENST00000406773 777 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 RPS3AP24-201ENST00000407896 734 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 MTND1P23-201ENST00000416931 372 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AC063976.3-201ENST00000426849 329 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 GTF2IP20-201ENST00000431663 360 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 RPS15AP28-201ENST00000435088 386 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 MTND1P33-201ENST00000446251 917 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AL049714.1-201ENST00000466686 347 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AC107626.1-201ENST00000471084 183 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AC147055.4-201ENST00000504399 745 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 RNU6-798P-201ENST00000516912 103 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AC006023.1-201ENST00000603944 259 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AC024595.1-201ENST00000623088 387 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 AP003399.1-201ENST00000637534 361 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 ZNF663P-202ENST00000641770 1131 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 ZNF90P1-201ENST00000480493 1951 ntBASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
TRBV27A0A0K0K1C4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 SNORA16B-201ENST00000364674 135 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 RNU4-52P-201ENST00000384209 138 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 RNU6-301P-201ENST00000384277 107 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 MIR7-1-201ENST00000384871 110 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 MIR670-201ENST00000390142 98 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AL356379.1-201ENST00000414105 126 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 RPP40P1-201ENST00000426762 456 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC107083.1-201ENST00000439643 279 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 MORF4L1P4-201ENST00000450245 976 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 RNU6-420P-201ENST00000458780 107 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 snoU109.4-201ENST00000458953 143 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC104164.3-201ENST00000467363 1258 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 RPL7P49-201ENST00000471402 708 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC022493.1-201ENST00000492984 337 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 CAB39P1-201ENST00000502277 460 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 RN7SKP132-201ENST00000516001 208 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 MIR514B-201ENST00000516774 80 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC083923.1-201ENST00000523708 376 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC021269.2-201ENST00000532318 330 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AL138976.2-201ENST00000563989 694 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC010738.1-201ENST00000604970 987 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC242628.1-201ENST00000606810 391 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC016542.1-201ENST00000608259 493 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC025016.1-201ENST00000616746 682 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC009159.1-201ENST00000618386 642 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC009831.4-201ENST00000620744 325 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AL160394.1-201ENST00000624765 724 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 MTND4P1-201ENST00000457501 1466 ntBASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.6□□□□□ -2.15
TRBV27A0A0K0K1C4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRBV27A0A0K0K1C4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRBV27A0A0K0K1C4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRBV27A0A0K0K1C4 AC097714.1-201ENST00000511272 1647 ntBASIC1.59□□□□□ -2.15
TRBV27A0A0K0K1C4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.59□□□□□ -2.15
TRBV27A0A0K0K1C4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
TRBV27A0A0K0K1C4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRBV27A0A0K0K1C4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRBV27A0A0K0K1C4 RNU4-23P-201ENST00000362839 140 ntBASIC1.59□□□□□ -2.15
TRBV27A0A0K0K1C4 SNORD82-201ENST00000365530 70 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms