Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 RNA5SP492-201ENST00000411330 114 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 SPA17P1-201ENST00000416656 452 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 RPS6P14-201ENST00000425165 719 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AC097499.1-201ENST00000444277 208 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AC010285.1-201ENST00000470580 392 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AP000889.2-201ENST00000532684 490 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AP000942.3-201ENST00000603702 160 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AL353997.5-201ENST00000618886 171 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 RNU6-1243P-201ENST00000364028 107 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 RN7SKP226-201ENST00000364912 300 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 HMGB1P47-201ENST00000511281 589 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AC008083.4-201ENST00000615076 444 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AC010297.1-201ENST00000623948 149 ntBASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN10AQ9Y5Y9 ZNF519P1-201ENST00000449011 1626 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AC080128.1-201ENST00000474389 1917 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 SNORD56.5-201ENST00000364281 72 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 CYCSP49-201ENST00000420810 319 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AC073310.1-201ENST00000423226 1033 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AL592045.1-201ENST00000429867 352 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AL590664.1-201ENST00000448065 339 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AC087879.1-201ENST00000474343 374 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AC091917.2-201ENST00000505002 744 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AC092470.1-201ENST00000546187 132 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 MIR3670-2-201ENST00000582974 65 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 MIR3670-1-201ENST00000584160 65 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 MIR3670-3-201ENST00000584855 65 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AL137847.3-201ENST00000611521 109 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 MIR3670-4-201ENST00000612260 65 ntBASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SCN10AQ9Y5Y9 RNU1-17P-201ENST00000363022 152 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 MIR583-201ENST00000384846 75 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 SNORA40.18-201ENST00000391200 128 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 AC104057.1-201ENST00000515547 497 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 GNAI2P1-201ENST00000541815 315 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 LRRC37A5P-203ENST00000580181 585 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 COX6CP3-201ENST00000580869 223 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 AC113368.1-201ENST00000603736 382 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 MIR8070-201ENST00000616510 88 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 AC068831.7-201ENST00000616954 363 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 Y_RNA.238-201ENST00000364441 102 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 ATP5F1P1-201ENST00000433775 569 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 RN7SKP219-201ENST00000516825 296 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 OR4G1P-201ENST00000588632 938 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 AC013562.2-201ENST00000611632 603 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 AC107905.1-201ENST00000616204 426 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 AC090897.3-201ENST00000636973 1157 ntBASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
SCN10AQ9Y5Y9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.22□□□□□ -2.05
SCN10AQ9Y5Y9 AC138915.1-201ENST00000565427 1685 ntBASIC2.22□□□□□ -2.05
SCN10AQ9Y5Y9 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCN10AQ9Y5Y9 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCN10AQ9Y5Y9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
SCN10AQ9Y5Y9 RNA5SP38-201ENST00000410750 119 ntBASIC2.22□□□□□ -2.05
SCN10AQ9Y5Y9 RNA5SP344-201ENST00000411081 104 ntBASIC2.22□□□□□ -2.05
SCN10AQ9Y5Y9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SCN10AQ9Y5Y9 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms