Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 RPL21P66-201ENST00000426566 466 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 RPS6P12-201ENST00000432491 726 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC016691.1-201ENST00000441321 413 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC114755.5-201ENST00000447760 831 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 RNU6-420P-201ENST00000458780 107 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 GMFBP1-201ENST00000467831 427 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 RN7SL303P-201ENST00000469773 251 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 HSPE1P6-201ENST00000479457 291 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC108860.1-201ENST00000484521 383 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC007224.1-201ENST00000564410 144 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC006270.2-201ENST00000578523 652 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AP002826.1-201ENST00000608835 315 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC006023.2-201ENST00000609916 167 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC023043.4-201ENST00000612081 449 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC005086.4-201ENST00000623065 213 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AC108467.2-201ENST00000617640 1597 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 RNU6-1090P-201ENST00000364065 94 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AL590762.2-201ENST00000395798 571 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 FGF7P8-201ENST00000402994 292 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 U3.35-201ENST00000408405 208 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 JKAMPP1-201ENST00000413804 919 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 RPS23P10-201ENST00000416185 486 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AL356867.1-201ENST00000429623 299 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 MTATP6P16-201ENST00000434543 526 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 RPS20P20-201ENST00000460498 340 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC078785.3-201ENST00000476607 425 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC106872.2-201ENST00000494303 480 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 RPL23AP55-201ENST00000498163 452 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AL359273.1-201ENST00000510918 627 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 SNORA31.8-201ENST00000516327 108 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC008489.1-201ENST00000524271 483 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AL355836.1-201ENST00000555951 870 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AL121992.2-201ENST00000606262 256 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 DISC2.1-201ENST00000612827 205 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AP001486.3-201ENST00000615334 372 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AL354950.2-201ENST00000617939 290 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 C2orf27A-204ENST00000623058 969 ntBASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA9Q9Y5G4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AL672167.1-203ENST00000641299 2975 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms