Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 ZNF519P1-201ENST00000449011 1626 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 SGO1P1-201ENST00000603525 1447 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 RNU6-883P-201ENST00000384597 107 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 MIR518C-201ENST00000384822 101 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 MIR627-201ENST00000384979 97 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 MIR16-1-201ENST00000385271 89 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 RPL17P50-201ENST00000396131 546 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AL024474.1-201ENST00000404655 591 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 MTND4LP7-201ENST00000431728 294 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC098826.1-201ENST00000433943 471 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AP000852.1-201ENST00000472460 573 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC011352.3-201ENST00000505162 593 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 RNA5SP24-201ENST00000516478 95 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 RPL7P20-201ENST00000520308 745 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC234778.2-201ENST00000566241 354 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC026790.2-201ENST00000606282 430 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC140725.3-201ENST00000616193 880 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC027309.3-201ENST00000623419 351 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 CTSLP2-204ENST00000629029 392 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC016717.2-201ENST00000609089 5141 ntBASIC2.2□□□□□ -2.06
HDGFL3Q9Y3E1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 RNU6-1155P-201ENST00000363554 107 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 SNORD51-201ENST00000384320 80 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 RPL27AP8-201ENST00000424277 446 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AC234781.2-201ENST00000426370 994 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 FCF1P1-201ENST00000432690 571 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 MTND3P4-201ENST00000453537 303 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AC108729.2-201ENST00000476543 840 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 CDC42P4-201ENST00000510507 563 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 ARL2BPP5-201ENST00000523141 481 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 MTCO1P47-201ENST00000523889 1271 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AC087276.1-201ENST00000529659 480 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 VN1R7P-201ENST00000619242 903 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 MIR1291-201ENST00000627649 87 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 AC135776.4-201ENST00000624300 1904 ntBASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
HDGFL3Q9Y3E1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AC008669.1-201ENST00000565823 2178 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 FRG1BP-201ENST00000278882 761 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 FTLP6-201ENST00000355274 422 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 RNU6-115P-201ENST00000364310 107 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 SNORD114-30-201ENST00000364448 72 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 SNORA80E-201ENST00000384744 137 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AL031679.1-201ENST00000400616 525 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AC096533.1-201ENST00000411645 353 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 VN1R42P-201ENST00000424651 344 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 RNFT1P2-201ENST00000443064 757 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 NAP1L1P3-201ENST00000462291 880 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AC126389.1-201ENST00000477436 290 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 RPL36AP51-201ENST00000487216 318 ntBASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.18□□□□□ -2.06
HDGFL3Q9Y3E1 AC087272.1-201ENST00000523624 533 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms