Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 SNORD84-203ENST00000584275 78 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC011471.1-201ENST00000585766 187 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC025165.5-201ENST00000602802 578 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC006077.1-201ENST00000604746 343 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC055876.5-201ENST00000605667 259 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC027807.2-201ENST00000616099 408 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC004009.2-201ENST00000623016 728 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC006378.2-201ENST00000623178 2476 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AL049780.3-201ENST00000624612 1583 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 MFSD8-236ENST00000641509 4050 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 Y_RNA.97-201ENST00000363094 102 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 RNU6-777P-201ENST00000364265 104 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 RNU6-1119P-201ENST00000384349 108 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 RNU6-192P-201ENST00000391253 100 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 MIR1183-201ENST00000408856 89 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AL031779.1-201ENST00000415663 330 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 BX842559.1-201ENST00000419615 532 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 ATP5JP1-201ENST00000431631 322 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 MTND1P28-201ENST00000435623 950 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC002381.1-201ENST00000447049 280 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 HMGB3P22-202ENST00000451823 572 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 OR6K1P-201ENST00000456766 971 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC034159.1-201ENST00000513885 583 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 FABP5P5-201ENST00000515537 406 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 RN7SKP57-201ENST00000517248 293 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC107016.1-201ENST00000550463 337 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AL391156.1-201ENST00000554965 554 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 AC078795.2-201ENST00000602835 1252 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 XIAPP1-201ENST00000603162 600 ntBASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK11AQ9UQ88 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 RNY4P24-201ENST00000362735 96 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 RNU5E-5P-201ENST00000365379 116 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 RNU6-712P-201ENST00000410558 100 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 RNA5SP120-201ENST00000410900 112 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 MTCO1P17-201ENST00000411522 491 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AC011742.1-201ENST00000431448 434 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AC010655.1-201ENST00000449336 292 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AC098824.1-201ENST00000453565 980 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 RPS4XP10-201ENST00000465034 731 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 GMPSP1-201ENST00000514075 579 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 RNU6-27P-201ENST00000516146 107 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 SUMO2P20-201ENST00000520803 283 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AC009101.1-201ENST00000568135 242 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AC005771.1-201ENST00000585581 349 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AC087683.1-201ENST00000591187 441 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 AC018755.4-201ENST00000619715 454 ntBASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDK11AQ9UQ88 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 LINC02471-203ENST00000641941 4752 ntBASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK11AQ9UQ88 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms