Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ZC3H4Q9UPT8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ZC3H4Q9UPT8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ZC3H4Q9UPT8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.26□□□□□ -1.41
ZC3H4Q9UPT8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
ZC3H4Q9UPT8 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ZC3H4Q9UPT8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ZC3H4Q9UPT8 RNA5SP90-201ENST00000364801 99 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 Y_RNA.461-201ENST00000384263 103 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 SNORA5.1-201ENST00000384275 131 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-434P-201ENST00000384376 107 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RNU11-4P-201ENST00000391149 133 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AL139039.1-201ENST00000401900 692 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 MRPS18CP6-201ENST00000423587 223 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RPL23AP69-201ENST00000431134 458 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 EZH2P1-201ENST00000431167 291 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 GEMIN8P3-201ENST00000445417 720 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AL354714.3-201ENST00000447284 493 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RNU4-77P-201ENST00000516692 156 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AP000889.1-201ENST00000530968 660 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC025423.5-201ENST00000550230 219 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC093227.2-201ENST00000589357 285 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC011494.1-201ENST00000596454 237 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC004805.2-201ENST00000605382 482 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AL161423.1-201ENST00000613700 262 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC015967.1-201ENST00000619893 476 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC091925.2-201ENST00000625059 256 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AL606534.2-204ENST00000635008 178 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RN7SKP145-201ENST00000363291 303 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-1284P-201ENST00000363701 100 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-1059P-201ENST00000363752 98 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-266P-201ENST00000364225 107 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-715P-201ENST00000365204 103 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 Y_RNA.380-201ENST00000365663 111 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-637P-201ENST00000384050 107 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 MIR23B-201ENST00000384832 97 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 U3.29-201ENST00000391296 212 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RPS4XP7-201ENST00000406274 780 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-293P-201ENST00000411259 106 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC096664.2-201ENST00000411843 406 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 CYCSP24-201ENST00000445119 316 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AP001086.1-201ENST00000494882 321 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC083829.1-201ENST00000503756 657 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC096745.1-201ENST00000509945 370 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 SNORD116-26-201ENST00000516006 96 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-475P-201ENST00000516073 104 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AP000769.2-201ENST00000602344 396 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC016727.2-201ENST00000603988 621 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 IGHV3-29-201ENST00000604817 344 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 SNORD58B-201ENST00000607313 66 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 MIR6716-201ENST00000613413 80 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 AC073869.8-201ENST00000641806 335 ntBASIC6.25□□□□□ -1.41
ZC3H4Q9UPT8 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC026523.2-201ENST00000625039 7739 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 RN7SKP185-201ENST00000362813 326 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 RNA5SP515-201ENST00000364570 118 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 Y_RNA.314-201ENST00000365114 102 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 SMIM11P1-201ENST00000369586 178 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 Y_RNA.399-201ENST00000383955 105 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 MIR129-1-201ENST00000384972 72 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AL445189.1-201ENST00000405722 338 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms