Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RNU6-88P-201ENST00000606801 100 ntBASIC3.32□□□□□ -1.88
HACD3Q9P035 AC072039.2-201ENST00000608883 439 ntBASIC3.32□□□□□ -1.88
HACD3Q9P035 AC018755.4-201ENST00000619715 454 ntBASIC3.32□□□□□ -1.88
HACD3Q9P035 U6.105-201ENST00000637379 88 ntBASIC3.32□□□□□ -1.88
HACD3Q9P035 OR8B1P-202ENST00000641132 1178 ntBASIC3.32□□□□□ -1.88
HACD3Q9P035 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
HACD3Q9P035 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HACD3Q9P035 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HACD3Q9P035 FAM35CP-201ENST00000554755 2470 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.31□□□□□ -1.88
HACD3Q9P035 RNU6-289P-201ENST00000364093 107 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 RNA5SP88-201ENST00000365560 109 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 RNU5A-2P-201ENST00000384337 116 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 RPL32P35-201ENST00000415214 394 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AC083875.1-201ENST00000419509 405 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 USP9YP26-201ENST00000421008 661 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.31□□□□□ -1.88
HACD3Q9P035 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.31□□□□□ -1.88
HACD3Q9P035 AC234781.2-201ENST00000426370 994 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.31□□□□□ -1.88
HACD3Q9P035 AC097713.2-201ENST00000430199 356 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.31□□□□□ -1.88
HACD3Q9P035 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.31□□□□□ -1.88
HACD3Q9P035 MTCO1P27-201ENST00000448269 226 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.31□□□□□ -1.88
HACD3Q9P035 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.31□□□□□ -1.88
HACD3Q9P035 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HACD3Q9P035 RPS27AP1-201ENST00000475545 471 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.31□□□□□ -1.88
HACD3Q9P035 AC023424.2-201ENST00000493479 777 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AC110794.1-201ENST00000505816 425 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AC093677.1-201ENST00000514414 678 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 RNA5SP217-201ENST00000515959 91 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 RNA5SP216-201ENST00000516111 123 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.31□□□□□ -1.88
HACD3Q9P035 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HACD3Q9P035 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.31□□□□□ -1.88
HACD3Q9P035 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.31□□□□□ -1.88
HACD3Q9P035 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.31□□□□□ -1.88
HACD3Q9P035 CCNG2P1-201ENST00000549521 1000 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AC135628.1-201ENST00000568867 534 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 MIR4429-201ENST00000580105 73 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 XIAPP1-201ENST00000603162 600 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AC068313.1-201ENST00000604028 1008 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.31□□□□□ -1.88
HACD3Q9P035 AL596245.1-201ENST00000618994 362 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.31□□□□□ -1.88
HACD3Q9P035 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 AL356596.1-201ENST00000624230 379 ntBASIC3.31□□□□□ -1.88
HACD3Q9P035 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HACD3Q9P035 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HACD3Q9P035 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HACD3Q9P035 AC002546.1-201ENST00000588041 2504 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HACD3Q9P035 AC004972.1-201ENST00000623934 2209 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HACD3Q9P035 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 Y_RNA.18-201ENST00000362461 102 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 Y_RNA.302-201ENST00000364997 102 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 RNU6-723P-201ENST00000383973 107 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 RNU6-1181P-201ENST00000384191 106 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HACD3Q9P035 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.3□□□□□ -1.88
HACD3Q9P035 HMGN1P24-201ENST00000412282 298 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 AC007899.1-201ENST00000412776 775 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.3□□□□□ -1.88
HACD3Q9P035 AL365203.2-201ENST00000423444 196 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.3□□□□□ -1.88
HACD3Q9P035 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 SNRPEP7-201ENST00000438350 220 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 AL445567.1-201ENST00000439121 144 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 HMGB3P11-201ENST00000440127 604 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 SDCBPP1-201ENST00000440192 890 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.3□□□□□ -1.88
HACD3Q9P035 PRDX3P3-201ENST00000447765 522 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 AL353691.1-201ENST00000451332 387 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 HMGB1P15-201ENST00000453854 435 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.3□□□□□ -1.88
HACD3Q9P035 AC008155.2-201ENST00000464337 397 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 RPS4XP10-201ENST00000465034 731 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 AC012181.1-201ENST00000479895 423 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.3□□□□□ -1.88
HACD3Q9P035 FAM172BP-201ENST00000487497 1089 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 AL024509.2-201ENST00000493462 493 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.3□□□□□ -1.88
HACD3Q9P035 COX7A2P2-201ENST00000505291 250 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.3□□□□□ -1.88
HACD3Q9P035 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.3□□□□□ -1.88
HACD3Q9P035 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.3□□□□□ -1.88
HACD3Q9P035 AC006390.1-201ENST00000508068 283 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 MTND1P22-201ENST00000510572 951 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.3□□□□□ -1.88
HACD3Q9P035 RNU6-678P-201ENST00000516832 109 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 RNU6-232P-201ENST00000517144 64 ntBASIC3.3□□□□□ -1.88
HACD3Q9P035 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.3□□□□□ -1.88
HACD3Q9P035 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms