Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LIN7CQ9NUP9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LIN7CQ9NUP9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.67□□□□□ -1.82
LIN7CQ9NUP9 PRO1804-201ENST00000623780 2050 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 RNU6-1120P-201ENST00000362988 108 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 SNORD113.2-201ENST00000364166 89 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 Y_RNA.367-201ENST00000365544 101 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 SMIM11P1-201ENST00000369586 178 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AL451054.2-201ENST00000420896 202 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 EIF1P1-201ENST00000421436 341 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 RPL27AP8-201ENST00000424277 446 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 TIMM9P3-201ENST00000428659 274 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 MTATP6P16-201ENST00000434543 526 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 MTATP6P13-201ENST00000438531 667 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 RPL23AP20-201ENST00000447965 421 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC012671.1-201ENST00000451912 203 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AL121877.1-201ENST00000453704 622 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 RPL12P20-201ENST00000475538 479 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 RPS4XP13-201ENST00000483219 789 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 HSPD1P15-201ENST00000505573 1122 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 VWA8P1-201ENST00000510889 176 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC105914.1-201ENST00000511798 226 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC011352.1-201ENST00000512300 793 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 RNU6-718P-201ENST00000516166 105 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 IGKV2D-19-201ENST00000523346 262 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AP006587.4-201ENST00000526053 529 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 PHBP17-201ENST00000528576 541 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AP003034.1-201ENST00000534621 422 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AL359212.1-201ENST00000556608 614 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC008536.2-201ENST00000607284 349 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC019193.2-201ENST00000610012 634 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 ZNF680P1-201ENST00000436625 1469 ntBASIC3.66□□□□□ -1.82
LIN7CQ9NUP9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
LIN7CQ9NUP9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
LIN7CQ9NUP9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.65□□□□□ -1.82
LIN7CQ9NUP9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LIN7CQ9NUP9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 RNA5SP52-201ENST00000362448 134 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 RNU6-1085P-201ENST00000363576 107 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 Y_RNA.381-201ENST00000365666 102 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 RPS4XP8-201ENST00000402039 771 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 RPL23AP48-201ENST00000406913 488 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AC114491.1-201ENST00000416095 246 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AC245028.1-201ENST00000423259 256 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 MTCO3P30-201ENST00000426425 670 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 UBE2V1P8-201ENST00000437166 265 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 HLA-N-201ENST00000437516 135 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AL512326.1-201ENST00000443050 721 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 RPS4XP4-201ENST00000443195 763 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 RPL9P32-201ENST00000464118 620 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AL672167.3-201ENST00000465951 960 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AC126389.1-201ENST00000477436 290 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AC117522.1-201ENST00000509821 380 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AF213884.2-201ENST00000510417 903 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 ARL2BPP6-201ENST00000512757 439 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AL117351.2-201ENST00000513571 157 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AP001646.1-201ENST00000527936 915 ntBASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.65□□□□□ -1.83
LIN7CQ9NUP9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms