Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MIR4287-201ENST00000579398 78 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC090897.2-201ENST00000581715 130 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC008121.1-201ENST00000603244 268 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 DUXAP11-201ENST00000603858 526 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC021749.1-201ENST00000604322 607 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AP001521.1-201ENST00000609150 300 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL589743.7-201ENST00000612637 233 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 KDM5DP1-201ENST00000622542 298 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AC004009.2-201ENST00000623016 728 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 AL590396.4-201ENST00000636779 956 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 U6.101-201ENST00000637707 76 ntBASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.27□□□□□ -2.21
CDC42SE1Q9NRR8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 RPL7P60-201ENST00000397636 735 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AL109755.1-201ENST00000401791 649 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 GSTA9P-201ENST00000406231 611 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 SNORA11B-201ENST00000408175 129 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 RNU2-28P-201ENST00000410457 189 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 RNA5SP338-201ENST00000410495 85 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 LUZP4P1-201ENST00000415420 344 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 XKRYP1-201ENST00000423438 492 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC023141.6-201ENST00000429418 337 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AL590233.1-201ENST00000430017 456 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 MTND2P5-201ENST00000432656 1006 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 MICF-203ENST00000432679 129 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 XKRYP2-201ENST00000432915 492 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC236972.1-201ENST00000433225 199 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 ZFAND6P1-201ENST00000434138 605 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC004383.1-201ENST00000438135 289 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 RPS3AP12-201ENST00000443616 753 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC112492.1-201ENST00000449607 712 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 RPS4XP15-201ENST00000489210 795 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 RN7SL323P-201ENST00000494712 295 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC098591.2-201ENST00000510152 315 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 UBE2Q2P10-201ENST00000514854 900 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC100870.1-201ENST00000522035 505 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC024224.1-201ENST00000538284 609 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC105137.2-201ENST00000569073 466 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 MIR5571-201ENST00000577998 113 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 BNIP3P24-201ENST00000593398 557 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC025165.5-201ENST00000602802 578 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AL109918.3-201ENST00000603072 338 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AL161729.4-201ENST00000604650 476 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC004853.1-201ENST00000604902 698 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 MIR6762-201ENST00000613340 86 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AC104307.1-201ENST00000616142 196 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AL445567.2-201ENST00000618935 498 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AL445528.2-201ENST00000620582 470 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 DUXAP9-208ENST00000622815 614 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 MIR3651-201ENST00000630427 90 ntBASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.26□□□□□ -2.21
CDC42SE1Q9NRR8 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC004520.1-201ENST00000608362 1413 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC000403.1-201ENST00000613696 3585 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 FTLP6-201ENST00000355274 422 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 ACEA_U3.1-201ENST00000363057 217 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 SUGT1P1-201ENST00000379514 476 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 Y_RNA.548-201ENST00000384656 105 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RNU6-750P-201ENST00000390946 107 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 U3.26-201ENST00000391236 204 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RNA5SP270-201ENST00000411361 118 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 RPL7P8-201ENST00000411964 730 ntBASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.25□□□□□ -2.21
CDC42SE1Q9NRR8 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms