Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RPL17P12-201ENST00000413391 526 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 RPS7P15-201ENST00000415804 584 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 MTND1P28-201ENST00000435623 950 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 RSU1P2-202ENST00000437884 485 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 HSPE1P28-201ENST00000443139 211 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 USP9YP29-201ENST00000445112 563 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AL592447.1-201ENST00000447592 540 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 CYCSP35-201ENST00000451978 304 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 RPS27P29-201ENST00000463110 252 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AP000797.1-201ENST00000478870 387 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 OR5H5P-201ENST00000503164 928 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC022447.3-201ENST00000506865 495 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 HIGD1AP3-201ENST00000515857 278 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AP002963.1-201ENST00000530590 184 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AGGF1P4-201ENST00000568249 801 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC005951.1-201ENST00000576706 485 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 OR4G1P-201ENST00000588632 938 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 BBIP1P1-201ENST00000602999 279 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 BCRP9-201ENST00000605312 388 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AP003117.2-201ENST00000606010 545 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AP000254.1-201ENST00000609934 520 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AL591516.1-201ENST00000611326 274 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC010678.1-201ENST00000614118 713 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 MIR7975-201ENST00000619350 68 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC004009.2-201ENST00000623016 728 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 MIR4496-201ENST00000635896 61 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SIX2Q9NPC8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SIX2Q9NPC8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SIX2Q9NPC8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SIX2Q9NPC8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SIX2Q9NPC8 SNORA71.3-201ENST00000362582 128 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 OR5H15-201ENST00000383696 930 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 U8.14-201ENST00000390843 143 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 MIR1305-201ENST00000408300 86 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 MTCO2P5-201ENST00000422621 426 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 RPL37P21-201ENST00000435890 276 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC127537.2-201ENST00000439258 465 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 PRDX3P3-201ENST00000447765 522 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 SUMO2P2-201ENST00000456482 255 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 HMGB1P36-201ENST00000487709 576 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC093278.1-201ENST00000494700 600 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC079140.3-201ENST00000511111 550 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC116347.2-201ENST00000514912 523 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC025881.1-201ENST00000518851 512 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 MIR4444-1-201ENST00000581696 74 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AP001180.3-201ENST00000582221 145 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 MIR4444-2-201ENST00000584390 74 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 MIR548AB-201ENST00000584917 84 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 PRELID3BP8-201ENST00000604148 295 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 AC097714.1-201ENST00000511272 1647 ntBASIC3.4□□□□□ -1.87
SIX2Q9NPC8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SIX2Q9NPC8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
SIX2Q9NPC8 MTCO1P12-201ENST00000414273 1543 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms