Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
VTA1Q9NP79 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VTA1Q9NP79 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VTA1Q9NP79 AC016588.2-201ENST00000632484 3021 ntBASIC4.64□□□□□ -1.67
VTA1Q9NP79 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VTA1Q9NP79 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 OR1S2-201ENST00000302592 978 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 RNU6-1155P-201ENST00000363554 107 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 Y_RNA.453-201ENST00000384223 109 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 MIR708-201ENST00000390708 88 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 SNORD115-47-201ENST00000391226 86 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 AL109755.1-201ENST00000401791 649 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 AL603766.1-201ENST00000407763 664 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 MTATP6P18-201ENST00000417994 673 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 NANOGP10-201ENST00000453325 895 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC034236.1-201ENST00000469891 373 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 RNU6-798P-201ENST00000516912 103 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 RNU6-410P-201ENST00000517006 107 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC100870.1-201ENST00000522035 505 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 AL121603.1-201ENST00000553815 142 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 RPL21P12-201ENST00000559810 515 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC025678.1-201ENST00000567861 338 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 AL391646.1-201ENST00000603860 190 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 AL008636.1-201ENST00000625038 1018 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 DDX10P1-201ENST00000448545 1933 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VTA1Q9NP79 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VTA1Q9NP79 AC092435.4-201ENST00000623012 4159 ntBASIC4.63□□□□□ -1.67
VTA1Q9NP79 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VTA1Q9NP79 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.63□□□□□ -1.67
VTA1Q9NP79 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VTA1Q9NP79 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.62□□□□□ -1.67
VTA1Q9NP79 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VTA1Q9NP79 HSPE1P11-201ENST00000339579 310 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 RNU6-282P-201ENST00000365357 103 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 RNU1-39P-201ENST00000383897 165 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 RNU6-456P-201ENST00000384493 107 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VTA1Q9NP79 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VTA1Q9NP79 AL583834.1-201ENST00000406943 343 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 AC022028.1-201ENST00000412054 408 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.62□□□□□ -1.67
VTA1Q9NP79 MTCO3P12-201ENST00000416718 547 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.62□□□□□ -1.67
VTA1Q9NP79 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.62□□□□□ -1.67
VTA1Q9NP79 AC016696.1-201ENST00000446949 318 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 VN1R34P-201ENST00000447387 883 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 WASF1P1-201ENST00000447560 1131 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.62□□□□□ -1.67
VTA1Q9NP79 AC021146.1-201ENST00000511202 716 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 ARL2BPP6-201ENST00000512757 439 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 AC090572.1-201ENST00000519251 160 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.62□□□□□ -1.67
VTA1Q9NP79 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
VTA1Q9NP79 AC063950.1-201ENST00000552036 308 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 AL512360.1-201ENST00000555346 234 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.62□□□□□ -1.67
VTA1Q9NP79 AL592436.1-201ENST00000605135 558 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 AC139792.3-201ENST00000623525 224 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 AC112200.1-201ENST00000625015 234 ntBASIC4.62□□□□□ -1.67
VTA1Q9NP79 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VTA1Q9NP79 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VTA1Q9NP79 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.62□□□□□ -1.67
VTA1Q9NP79 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VTA1Q9NP79 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VTA1Q9NP79 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTA1Q9NP79 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTA1Q9NP79 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VTA1Q9NP79 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.61□□□□□ -1.67
VTA1Q9NP79 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 MIR670-201ENST00000390142 98 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.61□□□□□ -1.67
VTA1Q9NP79 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms