Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.5□□□□□ -2.01
HMG20AQ9NP66 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HMG20AQ9NP66 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 RNU6-216P-201ENST00000363282 104 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 SNORA38.1-201ENST00000364172 131 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 DEFB109C-201ENST00000382575 264 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 DEFB109B-201ENST00000382656 264 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 DHFRP6-201ENST00000401776 268 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 RNU4-22P-201ENST00000411058 166 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 RPL7P8-201ENST00000411964 730 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 Z75741.2-201ENST00000417272 1167 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 MRPS36P1-201ENST00000421291 307 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 HSFY7P-201ENST00000432672 318 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 HSFY8P-201ENST00000437934 318 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 USP9YP22-201ENST00000438971 294 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 RPL39P6-201ENST00000448289 150 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 HSFY5P-201ENST00000453726 309 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AC108734.3-201ENST00000481241 1165 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AC006445.1-201ENST00000491925 405 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AL024509.2-201ENST00000493462 493 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 OR2A20P-203ENST00000498397 1268 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 TMEM251P1-201ENST00000503717 318 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 PSMA2P1-201ENST00000526365 646 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AC024224.1-201ENST00000538284 609 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 MTCYBP23-201ENST00000558717 1102 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AL132657.2-201ENST00000564417 358 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AC245036.5-201ENST00000596330 847 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 RPL23AP78-201ENST00000599928 470 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 YPEL5P2-201ENST00000605553 359 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AL157392.4-201ENST00000609756 345 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 FO624990.1-201ENST00000636373 85 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AC099654.9-201ENST00000637055 678 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.49□□□□□ -2.01
HMG20AQ9NP66 AL049780.3-201ENST00000624612 1583 ntBASIC2.49□□□□□ -2.01
HMG20AQ9NP66 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 SNORA9.2-201ENST00000365361 133 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 RNU1-138P-201ENST00000384093 164 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 RNU6-1181P-201ENST00000384191 106 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 RNU6-1242P-201ENST00000391052 103 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 SNORA48.7-201ENST00000391302 135 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AL356057.2-201ENST00000403318 432 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 RNA5SP80-201ENST00000410475 111 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 YPEL5P1-201ENST00000419731 367 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 MTCO2P23-201ENST00000425216 680 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC233728.2-201ENST00000425348 757 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AL513043.1-201ENST00000439124 535 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC092427.1-201ENST00000439177 601 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AL358794.1-201ENST00000445689 381 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 TRGVB-201ENST00000453257 471 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 USP9YP34-201ENST00000453983 808 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 PNPLA4P1-201ENST00000458328 305 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 snoU109.3-201ENST00000459477 145 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 RPL27AP5-201ENST00000469428 449 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 HMGB1P28-201ENST00000507778 552 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC006390.1-201ENST00000508068 283 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC113347.3-201ENST00000509113 148 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 OR10V3P-201ENST00000525712 725 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 RPL12P50-201ENST00000603116 116 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC092953.2-201ENST00000608000 699 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AC104763.3-201ENST00000613765 618 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 AL353748.2-201ENST00000622148 471 ntBASIC2.48□□□□□ -2.01
HMG20AQ9NP66 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HMG20AQ9NP66 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms