Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL356387.2-201ENST00000422272 243 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 RPL7AP25-201ENST00000423357 805 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AL163540.1-201ENST00000485382 386 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC017037.1-201ENST00000508460 471 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC093677.1-201ENST00000514414 678 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC090502.2-201ENST00000549267 280 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 SCOCP1-201ENST00000554676 349 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 MIR4742-201ENST00000581069 85 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC011468.4-201ENST00000603942 409 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC016925.2-201ENST00000605108 242 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 AC090425.1-201ENST00000610007 140 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 MIR6716-201ENST00000613413 80 ntBASIC4.68□□□□□ -1.66
CD248Q9HCU0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD248Q9HCU0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.68□□□□□ -1.66
CD248Q9HCU0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD248Q9HCU0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD248Q9HCU0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD248Q9HCU0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD248Q9HCU0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AP002907.1-201ENST00000606361 1430 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD248Q9HCU0 RNU6-251P-201ENST00000363235 104 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 Y_RNA.133-201ENST00000363428 110 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 RNA5SP167-201ENST00000365461 116 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 RNU6-196P-201ENST00000384315 107 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD248Q9HCU0 MIR921-201ENST00000401133 56 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 RPL7P25-201ENST00000404151 721 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 MTCO2P27-201ENST00000420740 428 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 USP9YP7-201ENST00000436723 430 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 HLA-N-201ENST00000437516 135 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 RSU1P2-202ENST00000437884 485 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 USP9YP32-201ENST00000452432 430 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 RPL23AP24-201ENST00000458203 385 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC087385.1-201ENST00000475062 312 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC012158.1-204ENST00000483430 465 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC025164.1-201ENST00000496249 478 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC020593.1-201ENST00000507399 299 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 FTH1P9-201ENST00000513251 355 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC008694.2-201ENST00000517591 306 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC022616.6-201ENST00000520479 119 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC100830.2-201ENST00000581636 240 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 MIR3138-201ENST00000585238 82 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC010591.1-201ENST00000603941 649 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC068724.3-201ENST00000625906 87 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 MIR4496-201ENST00000635896 61 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 AC010149.2-201ENST00000637608 315 ntBASIC4.67□□□□□ -1.66
CD248Q9HCU0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD248Q9HCU0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD248Q9HCU0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CD248Q9HCU0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD248Q9HCU0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD248Q9HCU0 AC119744.1-201ENST00000454746 1715 ntBASIC4.66□□□□□ -1.66
CD248Q9HCU0 NUP58P1-201ENST00000502546 1738 ntBASIC4.66□□□□□ -1.66
CD248Q9HCU0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms