Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AC026464.5-201ENST00000562497 722 ntBASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AC090615.1-201ENST00000577519 154 ntBASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 MIR4424-201ENST00000585257 86 ntBASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 MIR8059-201ENST00000620427 81 ntBASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AC007546.2-201ENST00000623996 360 ntBASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AC008785.1-201ENST00000624475 456 ntBASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
BCAS3Q9H6U6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
BCAS3Q9H6U6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
BCAS3Q9H6U6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
BCAS3Q9H6U6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
BCAS3Q9H6U6 AL606537.1-201ENST00000607258 2011 ntBASIC4.84□□□□□ -1.64
BCAS3Q9H6U6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
BCAS3Q9H6U6 AC006971.1-201ENST00000407916 4486 ntBASIC4.84□□□□□ -1.64
BCAS3Q9H6U6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 MTND5P28-201ENST00000438005 1594 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 RNA5SP307-201ENST00000362863 116 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 RNA5SP175-201ENST00000364275 119 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 Y_RNA.301-201ENST00000364990 103 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 RNA5SP283-201ENST00000365604 119 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 RNU6-38P-201ENST00000384085 107 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 RNU6-1297P-201ENST00000384415 104 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 SNORD66.1-201ENST00000391230 76 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AL022722.2-201ENST00000402519 180 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AL161631.1-201ENST00000417933 486 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC012065.2-201ENST00000421295 375 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 PPP1R2P5-201ENST00000457256 603 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 RNU6-333P-201ENST00000459117 107 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AP001992.1-205ENST00000462248 379 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC021382.1-201ENST00000483523 359 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC093853.1-201ENST00000515689 483 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 Y_RNA.718-201ENST00000517110 102 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 MIR2116-201ENST00000517221 80 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 IGLV3-26-201ENST00000520756 302 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC018442.3-201ENST00000523025 183 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AP003497.1-201ENST00000528472 562 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AP005435.4-201ENST00000529514 284 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC106785.1-201ENST00000565935 262 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 RPL23AP97-201ENST00000568955 471 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 VN1R85P-201ENST00000601587 426 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 DPPA3P3-201ENST00000603842 430 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AL080274.1-201ENST00000605565 220 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AP001486.3-201ENST00000615334 372 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC140113.4-201ENST00000622087 222 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AL161637.1-201ENST00000622380 412 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 MTND5P16-201ENST00000460269 1703 ntBASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BCAS3Q9H6U6 AC104118.1-201ENST00000607625 1589 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC104260.2-201ENST00000623551 3497 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 RNU1-20P-201ENST00000363314 162 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 Y_RNA.339-201ENST00000365325 102 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 RNU6-463P-201ENST00000384340 107 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 SNORD116-29-201ENST00000384516 83 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 MIR558-201ENST00000384920 94 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AL445189.1-201ENST00000405722 338 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AL356095.1-201ENST00000417217 199 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 ARL5AP1-201ENST00000418991 388 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 MED13P1-201ENST00000428342 171 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 COX6B1P7-201ENST00000430845 235 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 GPM6BP2-201ENST00000432046 144 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 GPM6BP1-201ENST00000446387 144 ntBASIC4.82□□□□□ -1.64
BCAS3Q9H6U6 AC006480.1-201ENST00000449887 378 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms