Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC109809.1-201ENST00000619665 545 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC013470.4-201ENST00000619978 986 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 CR381572.1-201ENST00000625098 102 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC008993.2-201ENST00000631744 806 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 U6.101-201ENST00000637707 76 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 MTCO1P23-201ENST00000415223 1526 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 RNU1-112P-201ENST00000364401 164 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 MT-TC-201ENST00000387405 66 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 U3.29-201ENST00000391296 212 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 USP9YP34-201ENST00000453983 808 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AC091179.1-201ENST00000461606 579 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 MTCYBP17-201ENST00000503579 789 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AC093767.1-201ENST00000504523 156 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 VN1R104P-201ENST00000505115 1009 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 RN7SKP132-201ENST00000516001 208 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 RNY4P37-201ENST00000516225 96 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 SLC2A13P1-201ENST00000531560 322 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 OR4K7P-201ENST00000580232 945 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AL669831.4-202ENST00000590817 238 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AC007349.4-201ENST00000608114 532 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AC005046.1-201ENST00000608515 625 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AC006927.4-201ENST00000639187 543 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 AP000776.1-201ENST00000530032 1663 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 TAB3P1-202ENST00000452645 1634 ntBASIC3.22□□□□□ -1.89
RNF41Q9H4P4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF41Q9H4P4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
RNF41Q9H4P4 RNU6-263P-201ENST00000363811 107 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 Y_RNA.493-201ENST00000384422 102 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 RPL22P18-201ENST00000417197 377 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 SDCBPP3-201ENST00000419629 891 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AC112220.1-201ENST00000434628 355 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 NECAP1P2-201ENST00000455668 727 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AC091951.3-201ENST00000504093 246 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AC007619.2-201ENST00000605743 379 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AC131235.4-201ENST00000609288 620 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 AC048347.1-201ENST00000624621 427 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 MIR1322-201ENST00000638013 71 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNF41Q9H4P4 MTND4P34-201ENST00000572715 1371 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 NUP58P1-201ENST00000502546 1738 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 ZNF876P-202ENST00000398732 1485 ntBASIC3.21□□□□□ -1.9
RNF41Q9H4P4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF41Q9H4P4 GDI2P1-201ENST00000429312 1336 ntBASIC3.2□□□□□ -1.9
RNF41Q9H4P4 MTND5P7-201ENST00000413558 1798 ntBASIC3.2□□□□□ -1.9
RNF41Q9H4P4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.2□□□□□ -1.9
RNF41Q9H4P4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RNF41Q9H4P4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RNF41Q9H4P4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RNF41Q9H4P4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF41Q9H4P4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
RNF41Q9H4P4 SNORD113-6-201ENST00000363345 75 ntBASIC3.2□□□□□ -1.9
RNF41Q9H4P4 SNORD82-201ENST00000365530 70 ntBASIC3.2□□□□□ -1.9
RNF41Q9H4P4 RNU6-629P-201ENST00000384061 103 ntBASIC3.2□□□□□ -1.9
RNF41Q9H4P4 SNRPEP2-201ENST00000397592 279 ntBASIC3.2□□□□□ -1.9
RNF41Q9H4P4 MIR1250-201ENST00000408098 113 ntBASIC3.2□□□□□ -1.9
RNF41Q9H4P4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF41Q9H4P4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.2□□□□□ -1.9
RNF41Q9H4P4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.2□□□□□ -1.9
RNF41Q9H4P4 DPPA2P1-201ENST00000428060 556 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms