Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
VCX3BQ9H321 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 MIR27B-201ENST00000385129 97 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 AL023807.1-201ENST00000407932 359 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VCX3BQ9H321 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 EIF4EP4-201ENST00000424916 578 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 RPS4XP10-201ENST00000465034 731 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 RPS29P26-201ENST00000477483 171 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 OR11H5P-201ENST00000554039 926 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 AC135628.1-201ENST00000568867 534 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 ATP1B3P1-201ENST00000605365 821 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 AC055876.5-201ENST00000605667 259 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 AC120053.1-201ENST00000607706 736 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 AC024941.1-201ENST00000612250 334 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VCX3BQ9H321 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 MIR1291-201ENST00000627649 87 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 MFSD8-245ENST00000641743 948 ntBASIC2.16□□□□□ -2.06
VCX3BQ9H321 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VCX3BQ9H321 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VCX3BQ9H321 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.16□□□□□ -2.06
VCX3BQ9H321 AC111188.2-201ENST00000529697 1387 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 RNU6-543P-201ENST00000362576 108 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 RNU6-730P-201ENST00000383954 104 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 MIR554-201ENST00000384874 96 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 TAF9BP2-201ENST00000400856 499 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 AL589655.1-201ENST00000405398 482 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 AL030996.1-201ENST00000411430 235 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 AL592148.1-201ENST00000413568 445 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 AC008280.1-201ENST00000418851 412 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 AL139413.1-201ENST00000421309 217 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 RNU6-420P-201ENST00000458780 107 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 RN7SL807P-201ENST00000470923 297 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 RNU2-44P-201ENST00000516795 194 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 MIR3935-201ENST00000583472 104 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 AC039056.2-201ENST00000622261 511 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
VCX3BQ9H321 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.15□□□□□ -2.07
VCX3BQ9H321 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 AC069528.2-201ENST00000624849 1991 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VCX3BQ9H321 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 MTND4P27-201ENST00000450813 1354 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 OR5H15-201ENST00000383696 930 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 GTF2IP20-201ENST00000431663 360 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 ARL4AP4-201ENST00000434170 518 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 AL021397.1-201ENST00000451806 248 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 NUTF2P7-201ENST00000453086 375 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 WBP1LP4-201ENST00000505043 344 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 AC010374.2-201ENST00000512933 535 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 RN7SKP31-201ENST00000516354 278 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 RNU6-928P-201ENST00000516876 104 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 AC007229.1-201ENST00000590455 412 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 AC025165.5-201ENST00000602802 578 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 AL627230.6-201ENST00000611129 280 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 STMN1P1-201ENST00000617809 440 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 AC040168.1-201ENST00000623594 991 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 AC090617.9-201ENST00000623751 147 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 AL160394.1-201ENST00000624765 724 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.14□□□□□ -2.07
VCX3BQ9H321 AC083865.1-201ENST00000636634 831 ntBASIC2.14□□□□□ -2.07
VCX3BQ9H321 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms