Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC006006.1-201ENST00000603082 144 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AL356218.2-201ENST00000605264 187 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AL022345.1-201ENST00000607292 135 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AC090425.1-201ENST00000610007 140 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 BMS1P21-201ENST00000634565 365 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF38Q9H0F5 MTCO1P24-201ENST00000515438 1558 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 AC007823.1-201ENST00000569932 1566 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 OR56B2P-202ENST00000641377 2453 ntBASIC4.82□□□□□ -1.64
RNF38Q9H0F5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 OR1S2-201ENST00000302592 978 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 Y_RNA.100-201ENST00000363141 102 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 RN7SKP44-201ENST00000363602 316 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 RNY3P13-201ENST00000365542 102 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AC068538.1-201ENST00000376856 336 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 RNU6-356P-201ENST00000384140 107 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 RNU6-1105P-201ENST00000384774 107 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 CKS1BP5-201ENST00000434172 273 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 NANOGP10-201ENST00000453325 895 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AC012181.1-201ENST00000479895 423 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AC025164.1-201ENST00000496249 478 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 HMGB3P15-201ENST00000507326 574 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 FAM206BP-201ENST00000510179 541 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AC093853.1-201ENST00000515689 483 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 MYL12AP1-201ENST00000518490 515 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 DPPA3P3-201ENST00000603842 430 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AL445487.1-201ENST00000415694 1580 ntBASIC4.81□□□□□ -1.64
RNF38Q9H0F5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF38Q9H0F5 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC091046.3-201ENST00000631455 1574 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RNU6-97P-201ENST00000363387 104 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 Y_RNA.234-201ENST00000364409 97 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 SNORA71.2-201ENST00000364941 134 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RNU6-38P-201ENST00000384085 107 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RNU6-196P-201ENST00000384315 107 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 Y_RNA.493-201ENST00000384422 102 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RNU6-907P-201ENST00000390924 102 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AP000580.1-201ENST00000404439 358 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AL606923.1-201ENST00000406616 190 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RNU2-39P-201ENST00000410604 198 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RPL7AP25-201ENST00000423357 805 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 CHIAP3-201ENST00000423668 1133 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RPS3AP52-201ENST00000435639 297 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 TIMM9P1-201ENST00000436122 256 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC073587.1-201ENST00000447093 876 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RNU6-333P-201ENST00000459117 107 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RPS23P7-201ENST00000466210 444 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 NIP7P2-201ENST00000485801 544 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 SNORD27.1-201ENST00000516319 72 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 Y_RNA.682-201ENST00000516457 100 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RNU6-1038P-201ENST00000516516 104 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 OR4P1P-201ENST00000530808 1136 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 RPL21P12-201ENST00000559810 515 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 MIR4697-201ENST00000582977 78 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC105224.1-201ENST00000587055 421 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC245389.1-201ENST00000605141 529 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 CTHRC1P1-201ENST00000605383 469 ntBASIC4.8□□□□□ -1.64
RNF38Q9H0F5 AC004908.2-201ENST00000609090 574 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms