Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AL162274.2-201ENST00000614406 332 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC004808.1-201ENST00000627671 721 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC005832.2-201ENST00000538921 1430 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AL353743.1-202ENST00000431724 1695 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC012321.1-201ENST00000561622 1588 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 RNU5A-1-201ENST00000362698 116 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 RNU6-1122P-201ENST00000384449 107 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AL449283.1-202ENST00000418249 604 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 MRPS36P1-201ENST00000421291 307 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AL590383.1-201ENST00000428602 75 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 YWHAZP7-201ENST00000436906 631 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 SDCBPP1-201ENST00000440192 890 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC092798.1-201ENST00000458542 409 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC108734.3-201ENST00000481241 1165 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 RPL30P5-201ENST00000494923 336 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC026427.2-201ENST00000506228 536 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 MTCYBP16-201ENST00000509187 1129 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC109464.2-201ENST00000510242 943 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 CASP1P1-201ENST00000526345 212 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC090615.1-201ENST00000577519 154 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 DUXAP4-201ENST00000603046 613 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AL158163.2-201ENST00000619110 700 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC104985.3-201ENST00000623479 597 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 AC099654.8-201ENST00000637757 681 ntBASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.01□□□□□ -1.93
POLR1EQ9GZS1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC008264.2-201ENST00000610193 3731 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 MTCO1P9-201ENST00000505577 1534 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 SNORA9.2-201ENST00000365361 133 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 MIR491-201ENST00000384877 84 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 SNORA26.7-201ENST00000391288 122 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 MIR1289-1-201ENST00000408836 144 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC234781.2-201ENST00000426370 994 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC093151.1-201ENST00000427711 313 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 AL356867.1-201ENST00000429623 299 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC022018.1-201ENST00000430685 241 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 GTF2IP3-201ENST00000433887 494 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 RPL26P6-201ENST00000440913 438 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC079203.1-201ENST00000487972 404 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 DSTNP2-201ENST00000504533 515 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 RAC1P5-201ENST00000512182 576 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 RNU6-1225P-201ENST00000516336 65 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 OR5G4P-201ENST00000525251 760 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 SLC2A13P1-201ENST00000531560 322 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
POLR1EQ9GZS1 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC112220.2-201ENST00000605513 533 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 AF129408.1-201ENST00000608767 431 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 AL161629.2-201ENST00000615347 275 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 AC073348.1-201ENST00000623002 331 ntBASIC3□□□□□ -1.93
POLR1EQ9GZS1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3□□□□□ -1.93
POLR1EQ9GZS1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
POLR1EQ9GZS1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
POLR1EQ9GZS1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 AC005539.1-201ENST00000443768 1479 ntBASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 RNU6-28P-201ENST00000362378 107 ntBASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 RNU1-140P-201ENST00000365040 165 ntBASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 AL031679.1-201ENST00000400616 525 ntBASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 AL161449.1-201ENST00000414531 1199 ntBASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 RPL7P10-201ENST00000417407 739 ntBASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.99□□□□□ -1.93
POLR1EQ9GZS1 MTCO2P5-201ENST00000422621 426 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms